CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2BS_67D862F4A
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_2BS_67D862F4A
T130547_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2BS_67D862F4A.2
C2H2 ZF
193
215
QCVQCPARFSTVGALIEHAEKSH
Traes_2BS_67D862F4A.2
C2H2 ZF
229
252
DACPKCSKGFQDPVLLVEHVEREH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_52196
Hordeum vulgare
MLOC_52196
N
0.827
Traes_2AS_E9A1F35CB
Triticum aestivum
Traes_2AS_E9A1F35CB
N
0.827
Traes_2DS_2CE71025C
Triticum aestivum
Traes_2DS_2CE71025C
N
0.827
TRIUR3_28482
Triticum urartu
TRIUR3_28482
N
0.827
BRADI1G24140
Brachypodium distachyon
BRADI1G24140
N
0.818
BGIOSGA025973
Oryza indica
BGIOSGA025973
N
0.803
LPERR07G16580
Leersia perrieri
LPERR07G16580
N
0.803
OBART07G19250
Oryza barthii
OBART07G19250
N
0.803
OGLUM07G19030
Oryza glumaepatula
OGLUM07G19030
N
0.803
OLONG_002240
Oryza longistaminata
OLONG_002240
N
0.803
ONIVA07G17600
Oryza nivara
ONIVA07G17600
N
0.803
ORGLA07G0246500
Oryza glaberrima
ORGLA07G0246500
N
0.803
ORUFI07G20030
Oryza rufipogon
ORUFI07G20030
N
0.803
OS07G0569700
Oryza sativa
OS07G0569700
N
0.803
Sb02g036840
Sorghum bicolor
Sb02g036840
N
0.797
GRMZM2G081782
Zea mays
GRMZM2G081782
N
0.788
Si030697m.g
Setaria italica
Si030697m.g
N
0.773
Pavir.Ba00594
Panicum virgatum
Pavir.Ba00594
N
0.773
Pavir.J03938
Panicum virgatum
Pavir.J03938
N
0.773