ascl1a (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000012801 T037892_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASCL1
M04135_2.00 		Homo sapiens
NRCASSTGYN
NRCASSTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX 		0.894 0.980
ASCL1
M08055_2.00 		Homo sapiens
NNRGCAGCTGSNN
NNSCAGCTGCYNN		 ChIP-seq
Mathelier et al.(2014)
MA1100.1 		0.894 0.980
ASCL1
M08730_2.00 		Homo sapiens
NNVCASCTGCYBYN
NRVRGCAGSTGBNN		 Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A 		0.894 0.980
Ascl1
M08748_2.00 		Mus musculus
BHSCASCTGCYBBN
NVVRGCAGSTGSDV		 Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A 		0.894 0.980
Ascl1
M09464_2.00 		Mus musculus
NVCABCTGBBNN
NNVVCAGVTGBN		 Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840 		0.894 0.980
ASCL1
M09855_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_01 		0.894 0.980
ASCL1
M09856_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_02 		0.894 0.980
ASCL1
M09857_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6 		0.894 0.980
ASCL1
M04136_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX 		0.894 0.980
Ascl2
M00117_2.00 		Mus musculus
NVCABVTGBN
NVCABVTGBN		 PBM
Badis et al.(2009)
Ascl2_2654 		0.851 0.860
Ascl2
M02814_2.00 		Mus musculus
RRCAGCTGYY
RRCAGCTGYY		 SELEX
Jolma et al.(2013)
Ascl2_1 		0.851 0.860
Ascl2
M08744_2.00 		Mus musculus
RGCAGSTGB
VCASCTGCY		 Misc
Kulakovskiy et al.(2013)
ASCL2_MOUSE.H11MO.0.C 		0.851 0.860
ASCL2
M04207_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL2_eDBD_HT-SELEX 		0.851 0.840
ASCL2
M04209_2.00 		Homo sapiens
VCACRACGCD
HGCGTYGTGB		 SELEX
Yin et al.(2017)
ASCL2_FL_HT-SELEX_1 		0.851 0.840
ASCL2
M04210_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL2_FL_HT-SELEX_2 		0.851 0.840
ASCL2
M04208_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL2_eDBD_Methyl-HT-SELEX 		0.851 0.840
ASCL2
M04211_2.00 		Homo sapiens
VRCAGCTGYB
VRCAGCTGYB		 SELEX
Yin et al.(2017)
ASCL2_FL_Methyl-HT-SELEX 		0.851 0.840
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000032399 bHLH 91 141

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002049 Aedes aegypti AAEL002049 N
AALB005830 Anopheles albimanus AALB005830 N
AARA005744 Anopheles arabiensis AARA005744 N
AATE014920 Anopheles atroparvus AATE014920 N
ACHR008375 Anopheles christyi ACHR008375 N
ACOM038868 Anopheles coluzzii ACOM038868 N
ACUA002672 Anopheles culicifacies ACUA002672 N
ACYPI004686 Acyrthosiphon pisum ACYPI004686 N
ADAC003147 Anopheles darlingi ADAC003147 N
ADIR006896 Anopheles dirus ADIR006896 N
AEPI006442 Anopheles epiroticus AEPI006442 N
AFAF013492 Anopheles farauti AFAF013492 N
AFUN004883 Anopheles funestus AFUN004883 N
CYC Anopheles gambiae AGAP005655 N
AGAP012873 Anopheles gambiae AGAP012873 N
AMEC018494 Anopheles melas AMEC018494 N
AMEM006050 Anopheles merus AMEM006050 N
AQUA011207 Anopheles quadriannulatus AQUA011207 N
ASIS018029 Anopheles sinensis ASIS018029 N
ASTEI02247 Anopheles stephensi ASTEI02247 N
Cflo_03663--XP_001121441.1_APIME Camponotus floridanus Cflo_03663--XP_001121441.1_APIME N
CLEC000189 Cimex lectularius CLEC000189 N
CPIJ014938 Culex quinquefasciatus CPIJ014938 N
CpipJ_CPIJ014938 Culex pipiens CpipJ_CPIJ014938 N
DAPPUDRAFT_346995 Daphnia pulex DAPPUDRAFT_346995 N
GA21284 Drosophila pseudoobscura FBgn0081272 N
GF10846 Drosophila ananassae FBgn0087886 N
GH16911 Drosophila grimshawi FBgn0124382 N
GL15678 Drosophila persimilis FBgn0153282 N
GJ14003 Drosophila virilis FBgn0201221 N
GK17217 Drosophila willistoni FBgn0219216 N
GB43953 Apis mellifera GB43953 N
HMEL011026 Heliconius melpomene HMEL011026 N
Hsal_04208--XP_001121441.1_APIME Harpegnathos saltator Hsal_04208--XP_001121441.1_APIME N
L798_13398 Zootermopsis nevadensis L798_13398 N
LCUP007672 Lucilia cuprina LCUP007672 N
LDEC004019 Leptinotarsa decemlineata LDEC004019 N
MDOA007541 Musca domestica MDOA007541 N
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I
NV13263 Nasonia vitripennis NV13263 N
PHUM580780 Pediculus humanus PHUM580780 N
PPAI010392 Phlebotomus papatasi PPAI010392 N
RPRC000556 Rhodnius prolixus RPRC000556 N
SINV21276 Solenopsis invicta SINV21276 N
TC002494 Tribolium castaneum TC002494 N
YQE_03758 Dendroctonus ponderosae YQE_03758 N