POPTR_0004s17540 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0004s17540 T043797_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.914 0.902
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s17540.1 bHLH 42 92
POPTR_0004s17540.2 bHLH 42 92
POPTR_0004s17540.3 bHLH 42 92
POPTR_0004s17540.4 bHLH 42 92
POPTR_0004s17540.5 bHLH 42 92

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB001180 Anopheles albimanus AALB001180 N
AARA010780 Anopheles arabiensis AARA010780 I
AATE014886 Anopheles atroparvus AATE014886 I
ACEP20052 Atta cephalotes ACEP20052 N
ACOM039288 Anopheles coluzzii ACOM039288 I
ADIR011363 Anopheles dirus ADIR011363 I
AEPI004836 Anopheles epiroticus AEPI004836 N
AFAF002012 Anopheles farauti AFAF002012 I
AFUN008227 Anopheles funestus AFUN008227 I
AGAP008818 Anopheles gambiae AGAP008818 I
AMAM006507 Anopheles maculatus AMAM006507 N
AMEC005358 Anopheles melas AMEC005358 I
AMEM011238 Anopheles merus AMEM011238 I
AMIN007195 Anopheles minimus AMIN007195 I
AQUA004183 Anopheles quadriannulatus AQUA004183 N
ASIS007673 Anopheles sinensis ASIS007673 I
BGLB012024 Biomphalaria glabrata BGLB012024 N
CapteG166874 Capitella teleta CapteG166874 I
Cflo_00736--XP_001122746.1_APIME Camponotus floridanus Cflo_00736--XP_001122746.1_APIME I
CLEC006156 Cimex lectularius CLEC006156 I
CPIJ009205 Culex quinquefasciatus CPIJ009205 N
CpipJ_CPIJ009205 Culex pipiens CpipJ_CPIJ009205 N
Poxn Drosophila melanogaster FBgn0003130 D
GA20926 Drosophila pseudoobscura FBgn0080915 I
GF13369 Drosophila ananassae FBgn0090401 I
GG22332 Drosophila erecta FBgn0114504 I
GH20564 Drosophila grimshawi FBgn0128027 I
GI19757 Drosophila mojavensis FBgn0142494 I
GL11851 Drosophila persimilis FBgn0149459 I
GM20119 Drosophila sechellia FBgn0175002 I
GD25595 Drosophila simulans FBgn0196881 I
GJ18164 Drosophila virilis FBgn0205329 I
GK19611 Drosophila willistoni FBgn0221609 I
GE14129 Drosophila yakuba FBgn0231752 I
GB53602 Apis mellifera GB53602 I
Hsal_04457--XP_001122746.1_APIME Harpegnathos saltator Hsal_04457--XP_001122746.1_APIME I
KGM_19741 Danaus plexippus KGM_19741 I
L798_15746 Zootermopsis nevadensis L798_15746 I
LCUP005878 Lucilia cuprina LCUP005878 I
LDEC012325 Leptinotarsa decemlineata LDEC012325 N
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I
LLOJ000107 Lutzomyia longipalpis LLOJ000107 N
LotgiG99097 Lottia gigantea LotgiG99097 I
MDOA010966 Musca domestica MDOA010966 I
Ocbimv22007901m.g Octopus bimaculoides Ocbimv22007901m.g I
PHUM404840 Pediculus humanus PHUM404840 I
PPAI001293 Phlebotomus papatasi PPAI001293 I
SINV20844 Solenopsis invicta SINV20844 N
SMUV_0000337801 Syphacia muris SMUV_0000337801 I
SNAPOd2T00015161001 Oikopleura dioica SNAPOd2T00015161001 I
TC008672 Tribolium castaneum TC008672 I