CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_500871.1
(
Arabidopsis lyrata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
scaffold_500871.1
T044510_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_500871.1
bHLH
18
60
DQMIDLVSKLRQFLPEIQERRRSDKVSASKVLQETCNYIRKLH
Links
Other
bHLH
family TFs
Other
Arabidopsis lyrata
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRE5
Arabidopsis thaliana
AT3G28857
N
0.914
Bo2g146500
Brassica oleracea
Bo2g146500
N
0.914
Bo6g063200
Brassica oleracea
Bo6g063200
N
0.842
Bo7g086990
Brassica oleracea
Bo7g086990
N
0.914
Bo9g008670
Brassica oleracea
Bo9g008670
N
0.914
Bostr.0556s0535
Boechera stricta
Bostr.0556s0535
N
0.886
Bra025358
Brassica rapa
Bra025358
N
0.913
Bra028443
Brassica rapa
Bra028443
N
0.842
Bra033063
Brassica rapa
Bra033063
N
0.914
Cagra.3344s0001
Capsella grandiflora
Cagra.3344s0001
N
0.855
Carubv10018314m.g
Capsella rubella
Carubv10018314m.g
N
0.855
Gorai.005G139900
Gossypium raimondii
Gorai.005G139900
N
0.863
PRE1
Arabidopsis lyrata
scaffold_704049.1
N
0.843
Thhalv10005197m.g
Eutrema salsugineum
Thhalv10005197m.g
N
0.914
Thhalv10028074m.g
Eutrema salsugineum
Thhalv10028074m.g
N
0.843