CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10028074m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10028074m.g
T051300_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10028074m
bHLH
18
60
DQMIDLVTKLRQILPEIGQRRRSDKVSASKVLQETCNYIRNLN
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRE1
Arabidopsis lyrata
scaffold_704049.1
N
0.914
Bo6g063200
Brassica oleracea
Bo6g063200
N
0.913
Bra028443
Brassica rapa
Bra028443
N
0.913
PRE1
Arabidopsis thaliana
AT5G39860
N
0.877
Bostr.10058s0009
Boechera stricta
Bostr.10058s0009
N
0.846
PRE5
Arabidopsis thaliana
AT3G28857
N
0.843
Bo2g146500
Brassica oleracea
Bo2g146500
N
0.843
Bo7g086990
Brassica oleracea
Bo7g086990
N
0.843
Bo9g008670
Brassica oleracea
Bo9g008670
N
0.843
Bra033063
Brassica rapa
Bra033063
N
0.843
scaffold_500871.1
Arabidopsis lyrata
scaffold_500871.1
N
0.843
Thhalv10005197m.g
Eutrema salsugineum
Thhalv10005197m.g
N
0.843
Bra025358
Brassica rapa
Bra025358
N
0.842
Gorai.005G139900
Gossypium raimondii
Gorai.005G139900
N
0.839
Cagra.5905s0007
Capsella grandiflora
Cagra.5905s0007
N
0.528
Carubv10006122m.g
Capsella rubella
Carubv10006122m.g
N
0.528