Gfo_R005253 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R005253 T047320_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcfl5
M01744_2.00 		Mus musculus
NBCDCGHGVN
NBCDCGHGVN		 PBM
Weirauch et al.(2014)
pTH4576 		0.881 0.920
TCFL5
M04074_2.00 		Homo sapiens
KCRCGCGCHC
GDGCGCGYGM		 SELEX
Yin et al.(2017)
TCFL5_eDBD_HT-SELEX 		0.881 0.920
TCFL5
M04075_2.00 		Homo sapiens
BCRCGCGCMC
GKGCGCGYGV		 SELEX
Yin et al.(2017)
TCFL5_eDBD_Methyl-HT-SELEX 		0.881 0.920
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005253 bHLH 408 458

Links

Other bHLH family TFs
Other Geospiza fortis TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I
AALB007752 Anopheles albimanus AALB007752 I
AARA011472 Anopheles arabiensis AARA011472 I
AATE002063 Anopheles atroparvus AATE002063 I
ACEP16400 Atta cephalotes ACEP16400 I
ACEP16410 Atta cephalotes ACEP16410 I
ACOM031089 Anopheles coluzzii ACOM031089 I
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I
Afo_R012718 Aptenodytes forsteri Afo_R012718 I
AGAP001094 Anopheles gambiae AGAP001094 I
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I
AMEC007551 Anopheles melas AMEC007551 I
AMEM004753 Anopheles merus AMEM004753 I
AQUA009970 Anopheles quadriannulatus AQUA009970 I
ASTEI07771 Anopheles stephensi ASTEI07771 I
BGIBMGA008906 Bombyx mori BGIBMGA008906 I
BGLB004758 Biomphalaria glabrata BGLB004758 I
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I
DAPPUDRAFT_290557 Daphnia pulex DAPPUDRAFT_290557 I
EmuJ_000490800 Echinococcus multilocularis EmuJ_000490800 I
RUNX2 Anolis carolinensis ENSACAG00000013003 I
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I
RUNX2 Bos taurus ENSBTAG00000004104 I
RUNX3 Bos taurus ENSBTAG00000019800 I
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I
RUNX1 Callithrix jacchus ENSCJAG00000002816 I
RUNX3 Callithrix jacchus ENSCJAG00000020815 I
RUNX2 Cavia porcellus ENSCPOG00000005277 I
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I
runx2a Danio rerio ENSDARG00000040261 I
runx2b Danio rerio ENSDARG00000059233 I
CABZ01102124.1 Danio rerio ENSDARG00000103592 I
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I
RUNX1 Equus caballus ENSECAG00000003462 I
RUNX2 Equus caballus ENSECAG00000020875 I
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I
ENSFALG00000001493 Ficedula albicollis ENSFALG00000001493 I
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I
RUNX2 Homo sapiens ENSG00000124813 D
ENSGACG00000011721 Gasterosteus aculeatus ENSGACG00000011721 I
runx2b Gasterosteus aculeatus ENSGACG00000012322 I
RUNX1 Gasterosteus aculeatus ENSGACG00000015276 I
ENSGALG00000026484 Gallus gallus ENSGALG00000026484 I
RUNX2 Gorilla gorilla ENSGGOG00000012890 I
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I
RUNX2 Loxodonta africana ENSLAFG00000005054 I
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I
RUNX3 Myotis lucifugus ENSMLUG00000003395 I
RUNX1 Macaca mulatta ENSMMUG00000001649 I
RUNX2 Macaca mulatta ENSMMUG00000019819 I
RUNX2 Monodelphis domestica ENSMODG00000018912 I
RUNX1 Monodelphis domestica ENSMODG00000021051 I
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I
Runx1 Mus musculus ENSMUSG00000022952 D
Runx2 Mus musculus ENSMUSG00000039153 D
ENSOARG00000013599 Ovis aries ENSOARG00000013599 I
RUNX2 Otolemur garnettii ENSOGAG00000003900 I
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I
RUNX2 Ochotona princeps ENSOPRG00000002943 I
ENSP00000300305 Macaca fascicularis ENSP00000300305 I
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I
RUNX2 Pan troglodytes ENSPTRG00000018228 I
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I
Runx2 Rattus norvegicus ENSRNOG00000020193 I
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I
ENSTNIG00000009855 Tetraodon nigroviridis ENSTNIG00000009855 I
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I
runx2 Takifugu rubripes ENSTRUG00000003501 I
runx1 Takifugu rubripes ENSTRUG00000012611 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I
RUNX2 Tursiops truncatus ENSTTRG00000006943 I
RUNX1 Tursiops truncatus ENSTTRG00000014160 I
ENSXMAG00000006715 Xiphophorus maculatus ENSXMAG00000006715 I
lz Drosophila melanogaster FBgn0002576 D
run Drosophila melanogaster FBgn0003300 D
run Drosophila pseudoobscura FBgn0013862 I
run Drosophila virilis FBgn0013920 I
run Drosophila simulans FBgn0016352 I
GA13742 Drosophila pseudoobscura FBgn0073778 I
run Drosophila yakuba FBgn0084618 I
run Drosophila erecta FBgn0085118 I
GF15967 Drosophila ananassae FBgn0092990 I
GF15970 Drosophila ananassae FBgn0092993 I
GG18309 Drosophila erecta FBgn0110525 I
GG19691 Drosophila erecta FBgn0111893 I
GH17737 Drosophila grimshawi FBgn0125207 I
GH17740 Drosophila grimshawi FBgn0125210 I
GI15491 Drosophila mojavensis FBgn0138240 I
GL15800 Drosophila persimilis FBgn0153404 I
GL15806 Drosophila persimilis FBgn0153410 I
GL16499 Drosophila persimilis FBgn0154103 I
GM22478 Drosophila sechellia FBgn0177348 I
GM23044 Drosophila sechellia FBgn0177912 I
GM23050 Drosophila sechellia FBgn0177918 I
GD17495 Drosophila simulans FBgn0189047 I
GJ19245 Drosophila virilis FBgn0206390 I
GK19810 Drosophila willistoni FBgn0221808 I
GK19815 Drosophila willistoni FBgn0221813 I
GE17788 Drosophila yakuba FBgn0235232 I
GE17890 Drosophila yakuba FBgn0235328 I
GA22609 Drosophila pseudoobscura FBgn0244012 I
RunxB Drosophila melanogaster FBgn0259162 I
Gfo_R000714 Geospiza fortis Gfo_R000714 I
Gfo_R013848 Geospiza fortis Gfo_R013848 I
HDID_0000068701 Hymenolepis diminuta HDID_0000068701 I
HMEL009842 Heliconius melpomene HMEL009842 I
HmN_000789900 Hymenolepis microstoma HmN_000789900 I
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I
KGM_21067 Danaus plexippus KGM_21067 I
LCUP002656 Lucilia cuprina LCUP002656 I
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I
MCINX000302 Melitaea cinxia MCINX000302 I
MESCA007078 Megaselia scalaris MESCA007078 I
ML03045a Mnemiopsis leidyi ML03045a I
PHUM333310 Pediculus humanus PHUM333310 I
PPAI010986 Phlebotomus papatasi PPAI010986 I
Pvit_01165 Pogona vitticeps Pvit_01165 I
RPRC005391 Rhodnius prolixus RPRC005391 I
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I
SINV13317 Solenopsis invicta SINV13317 I
TC006536 Tribolium castaneum TC006536 I
TC006542 Tribolium castaneum TC006542 I
tetur01g02340 Tetranychus urticae tetur01g02340 I
runx2.L Xenopus laevis XB-GENE-864817 I
runx1.L Xenopus laevis XB-GENE-864949 I
XP_002939386 Xenopus tropicalis XP_002939386 I
XP_002939387 Xenopus tropicalis XP_002939387 I