CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm018950
(
Prunus mume
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pm018950
T047627_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.914
0.960
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm018950
bHLH
82
131
ASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLK
Links
Other
bHLH
family TFs
Other
Prunus mume
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M404DRAFT_172329
Pisolithus tinctorius
M404DRAFT_172329
N
PAXRUDRAFT_74013
Paxillus rubicundulus
PAXRUDRAFT_74013
N