CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK01630.1
(
Cannabis sativa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
PK01630.1
T051558_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.838
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01118_2.00
bHLH
51
100
ASKSHSQAEKRRRDRINAQLTTLRKLIPKSDKMDKAALLGSVIDHVKELK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK01630.1
bHLH
81
130
ASKSHSQAEKRRRDRINAQLTTLRKLIPKSDKMDKAALLGSVIDHVKELK
Links
Other
bHLH
family TFs
Other
Cannabis sativa
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA11G35480
Glycine max
GLYMA11G35480
I
0.914
GLYMA18G02940
Glycine max
GLYMA18G02940
I
0.914
POPTR_0008s07090
Populus trichocarpa
POPTR_0008s07090
I
0.914
PRUPE_ppa010134mg
Prunus persica
PRUPE_ppa010134mg
I
0.914
TCM_042475
Theobroma cacao
TCM_042475
I
0.914
VIT_13s0067g01350
Vitis vinifera
VIT_13s0067g01350
I
0.914
Cla006707
Citrullus lanatus
Cla006707
I
0.914
Pm018950
Prunus mume
Pm018950
I
0.914
cassava37862.valid.m1
Manihot esculenta
cassava37862.valid.m1
I
0.914
Cucsa.136730
Cucumis sativus
Cucsa.136730
I
0.914
Ciclev10032356m.g
Citrus clementina
Ciclev10032356m.g
I
0.914
Eucgr.J00190
Eucalyptus grandis
Eucgr.J00190
I
0.914
evm.TU.supercontig_19.156
Carica papaya
evm.TU.supercontig_19.156
I
0.914
Lus10007502.g
Linum usitatissimum
Lus10007502.g
I
0.914
Lus10028978.g
Linum usitatissimum
Lus10028978.g
I
0.914
orange1.1g023629m.g
Citrus sinensis
orange1.1g023629m.g
I
0.914
SapurV1A.0061s0470
Salix purpurea
SapurV1A.0061s0470
I
0.914
POPTR_0010s19400
Populus trichocarpa
POPTR_0010s19400
I
0.912
chr2.CM0002.120.nc
Lotus japonicus
chr2.CM0002.120.nc
I
0.903
MTR_3g070970
Medicago truncatula
MTR_3g070970
I
0.894
Ca_13402
Cicer arietinum
Ca_13402
I
0.894
29814.m000735
Ricinus communis
29814.m000735
I
0.894
Gorai.011G292100
Gossypium raimondii
Gorai.011G292100
I
0.894
gene21000-v1.0-hybrid
Fragaria vesca
gene21000-v1.0-hybrid
I
0.884
GLYMA02G42570
Glycine max
GLYMA02G42570
I
0.873
PGSC0003DMG400027725
Solanum tuberosum
PGSC0003DMG400027725
I
0.873
Solyc03g095980.2
Solanum lycopersicum
Solyc03g095980.2
I
0.873
Gorai.012G078100
Gossypium raimondii
Gorai.012G078100
I
0.873
PGSC0003DMG400015659
Solanum tuberosum
PGSC0003DMG400015659
I
0.846
Bra000177
Brassica rapa
Bra000177
I
0.845
fgenesh2_kg.108__1__AT2G40200.1
Arabidopsis lyrata
fgenesh2_kg.108__1__AT2G40200.1
I
0.845