PGSC0003DMG400015659 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400015659 T043462_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.846 0.800
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400040448 bHLH 50 99

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g051260.2 Solanum lycopersicum Solyc06g051260.2 N 0.890
PGSC0003DMG400027725 Solanum tuberosum PGSC0003DMG400027725 I 0.888
Solyc03g095980.2 Solanum lycopersicum Solyc03g095980.2 I 0.888
GLYMA02G42570 Glycine max GLYMA02G42570 I 0.858
Gorai.012G078100 Gossypium raimondii Gorai.012G078100 I 0.858
chr2.CM0002.120.nc Lotus japonicus chr2.CM0002.120.nc I 0.858
GLYMA11G35480 Glycine max GLYMA11G35480 I 0.846
GLYMA18G02940 Glycine max GLYMA18G02940 I 0.846
POPTR_0008s07090 Populus trichocarpa POPTR_0008s07090 I 0.846
PRUPE_ppa010134mg Prunus persica PRUPE_ppa010134mg I 0.846
TCM_042475 Theobroma cacao TCM_042475 I 0.846
VIT_13s0067g01350 Vitis vinifera VIT_13s0067g01350 I 0.846
Cla006707 Citrullus lanatus Cla006707 I 0.846
Pm018950 Prunus mume Pm018950 I 0.846
cassava37862.valid.m1 Manihot esculenta cassava37862.valid.m1 I 0.846
Cucsa.136730 Cucumis sativus Cucsa.136730 I 0.846
Ciclev10032356m.g Citrus clementina Ciclev10032356m.g I 0.846
Eucgr.J00190 Eucalyptus grandis Eucgr.J00190 I 0.846
evm.TU.supercontig_19.156 Carica papaya evm.TU.supercontig_19.156 I 0.846
gene21000-v1.0-hybrid Fragaria vesca gene21000-v1.0-hybrid I 0.846
Lus10007502.g Linum usitatissimum Lus10007502.g I 0.846
Lus10028978.g Linum usitatissimum Lus10028978.g I 0.846
orange1.1g023629m.g Citrus sinensis orange1.1g023629m.g I 0.846
SapurV1A.0061s0470 Salix purpurea SapurV1A.0061s0470 I 0.846
PK01630.1 Cannabis sativa PK01630.1 D 0.846
POPTR_0010s19400 Populus trichocarpa POPTR_0010s19400 I 0.844