CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29814.m000735
(
Ricinus communis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
29814.m000735
T047865_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.894
0.857
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29814.m000735
bHLH
85
133
SKSHSQAEKRRRDRINTQLGILRKLIPKSEKMDKAALLGSAIDQVKDLK
Links
Other
bHLH
family TFs
Other
Ricinus communis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_05407
Beauveria bassiana
BBA_05407
N
0.000
CFIO01_04511
Colletotrichum fioriniae
CFIO01_04511
I
0.000
CH063_11230
Colletotrichum higginsianum
CH063_11230
I
0.000
CHGG_08197
Chaetomium globosum
CHGG_08197
I
0.000
Cob_03888
Colletotrichum orbiculare
Cob_03888
I
0.000
e_gw1.2.156.1
Cryphonectria parasitica
e_gw1.2.156.1
I
0.000
fgenesh1_pm.sca_3_chr4_2_0000157
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000157
I
0.000
FGRRES_05157
Fusarium graminearum
FGRRES_05157
I
0.000
FPSE_06556
Fusarium pseudograminearum
FPSE_06556
I
0.000
GLRG_08668
Colletotrichum graminicola
GLRG_08668
I
0.000
MAC_07236
Metarhizium acridum
MAC_07236
N
0.000
MANI_028761
Metarhizium anisopliae
MANI_028761
N
0.000
MBR_05091
Metarhizium brunneum
MBR_05091
N
0.000
MGU_01580
Metarhizium guizhouense
MGU_01580
N
0.000
MYCTH_2311492
Myceliophthora thermophila
MYCTH_2311492
I
0.000
col-21
Neurospora crassa
NCU03489
D
0.000
NechaG92542
Fusarium solani
NechaG92542
I
0.000
NEUTE1DRAFT_66044
Neurospora tetrasperma
NEUTE1DRAFT_66044
I
0.000
PODANS_6_4250
Podospora anserina
PODANS_6_4250
I
0.000
S40285_03084
Stachybotrys chlorohalonata
S40285_03084
N
0.000
S40288_01677
Stachybotrys chartarum
S40288_01677
N
0.000
TRIVIDRAFT_229893
Trichoderma virens
TRIVIDRAFT_229893
I
0.000
UCRPA7_8227
Togninia minima
UCRPA7_8227
I
0.000
VDAG_07012
Verticillium dahliae
VDAG_07012
I
0.000
VHEMI05522
Torrubiella hemipterigena
VHEMI05522
I
0.000
X797_008871
Metarhizium robertsii
X797_008871
N
0.000