29883.m002023 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 29883.m002023 T047878_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.896
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.896
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.896
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.875
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.875
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.875
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29883.m002023 bHLH 356 403

Links

Other bHLH family TFs
Other Ricinus communis TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL014322 Aedes aegypti AAEL014322 I
AAL11024 Xenopus tropicalis AAL11024 I
AALB008334 Anopheles albimanus AALB008334 I
Aan_R006110 Calypte anna Aan_R006110 I
Aan_R006542 Calypte anna Aan_R006542 I
AAO11649 Xenopus laevis AAO11649 I
AARA002094 Anopheles arabiensis AARA002094 I
AATE018889 Anopheles atroparvus AATE018889 I
ABU42126 Xenopus laevis ABU42126 I
ACHR010174 Anopheles christyi ACHR010174 I
ACOM034431 Anopheles coluzzii ACOM034431 I
ACUA006973 Anopheles culicifacies ACUA006973 I
ADAC002492 Anopheles darlingi ADAC002492 I
ADIR010448 Anopheles dirus ADIR010448 I
AEPI006062 Anopheles epiroticus AEPI006062 I
AFAF001067 Anopheles farauti AFAF001067 I
Afo_R014067 Aptenodytes forsteri Afo_R014067 I
Afo_R014556 Aptenodytes forsteri Afo_R014556 I
AFUN011634 Anopheles funestus AFUN011634 I
Alligator_sinensis_CCG013129.1 Alligator sinensis Alligator_sinensis_CCG013129.1 I
Alligator_sinensis_CCG017418.1 Alligator sinensis Alligator_sinensis_CCG017418.1 I
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I
AMAM006832 Anopheles maculatus AMAM006832 I
AMEM001613 Anopheles merus AMEM001613 I
AMIN003460 Anopheles minimus AMIN003460 I
AQUA000514 Anopheles quadriannulatus AQUA000514 I
ASTEI05690 Anopheles stephensi ASTEI05690 I
Brh_R000054 Buceros rhinoceros Brh_R000054 I
Brh_R006718 Buceros rhinoceros Brh_R006718 I
CLEC002330 Cimex lectularius CLEC002330 I
CPIJ005345 Culex quinquefasciatus CPIJ005345 I
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I
D917_06339 Trichinella nativa D917_06339 I
D918_04086 Trichuris suis D918_04086 I
EFV52759 Trichinella spiralis EFV52759 I
MYOD1 Anolis carolinensis ENSACAG00000000054 I
MYF6 Anolis carolinensis ENSACAG00000022851 I
ENSAMEG00000013193 Ailuropoda melanoleuca ENSAMEG00000013193 I
ENSAMEG00000013207 Ailuropoda melanoleuca ENSAMEG00000013207 I
ENSAMEG00000018197 Ailuropoda melanoleuca ENSAMEG00000018197 I
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I
ENSAPLG00000002254 Anas platyrhynchos ENSAPLG00000002254 I
ENSAPLG00000005673 Anas platyrhynchos ENSAPLG00000005673 I
MYOD1 Bos taurus ENSBTAG00000002216 I
MYF6 Bos taurus ENSBTAG00000014003 I
MYF5 Bos taurus ENSBTAG00000026972 I
ENSBTAP00000002868-D1 Bos grunniens ENSBTAP00000002868-D1 I
MYF6 Canis familiaris ENSCAFG00000005805 I
MYF5 Canis familiaris ENSCAFG00000005808 I
MYOD1 Canis familiaris ENSCAFG00000009066 I
MYF5 Choloepus hoffmanni ENSCHOG00000008319 I
MYOD1 Callithrix jacchus ENSCJAG00000009258 I
MYF6 Callithrix jacchus ENSCJAG00000019339 I
MYF5 Callithrix jacchus ENSCJAG00000019340 I
ENSCPOG00000007763 Cavia porcellus ENSCPOG00000007763 I
MYF5 Cavia porcellus ENSCPOG00000007766 I
MYOD1 Cavia porcellus ENSCPOG00000021351 I
ENSCSAG00000003889 Chlorocebus sabaeus ENSCSAG00000003889 I
ENSCSAG00000003893 Chlorocebus sabaeus ENSCSAG00000003893 I
ENSCSAG00000004934 Chlorocebus sabaeus ENSCSAG00000004934 I
myf5 Danio rerio ENSDARG00000007277 I
myod1 Danio rerio ENSDARG00000030110 I
MYOD1 Dasypus novemcinctus ENSDNOG00000017164 I
MYF6 Dasypus novemcinctus ENSDNOG00000019387 I
MYF5 Dasypus novemcinctus ENSDNOG00000034747 I
Myf5 Dipodomys ordii ENSDORG00000015437 I
MYOD1 Equus caballus ENSECAG00000002132 I
MYF6 Equus caballus ENSECAG00000018919 I
MYF5 Equus caballus ENSECAG00000020047 I
MYF5 Erinaceus europaeus ENSEEUG00000011612 I
MYOD1 Echinops telfairi ENSETEG00000003979 I
MYF5 Echinops telfairi ENSETEG00000011255 I
ENSFALG00000000758 Ficedula albicollis ENSFALG00000000758 I
ENSFALG00000010503 Ficedula albicollis ENSFALG00000010503 I
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I
MYOD1 Felis catus ENSFCAG00000004973 I
MYF6 Felis catus ENSFCAG00000015010 I
MYF5 Felis catus ENSFCAG00000015011 I
MYF6 Homo sapiens ENSG00000111046 D
MYF5 Homo sapiens ENSG00000111049 D
MYOD1 Homo sapiens ENSG00000129152 D
myod1 Gasterosteus aculeatus ENSGACG00000008444 I
myod1 Gasterosteus aculeatus ENSGACG00000017350 I
myf6 Gasterosteus aculeatus ENSGACG00000020008 I
MYOD1 Gallus gallus ENSGALG00000006216 I
MYF6 Gallus gallus ENSGALG00000010936 I
MYF5 Gallus gallus ENSGALG00000028091 I
MYF5 Gorilla gorilla ENSGGOG00000004366 I
MYF6 Gorilla gorilla ENSGGOG00000004369 I
MYOD1 Gorilla gorilla ENSGGOG00000008222 I
ENSGMOG00000011389 Gadus morhua ENSGMOG00000011389 I
ENSGMOG00000016963 Gadus morhua ENSGMOG00000016963 I
ENSLACG00000014430 Latimeria chalumnae ENSLACG00000014430 I
MYF5 Loxodonta africana ENSLAFG00000016473 I
MYF6 Loxodonta africana ENSLAFG00000016476 I
MYOD1 Loxodonta africana ENSLAFG00000018353 I
ENSLOCG00000002164 Lepisosteus oculatus ENSLOCG00000002164 I
ENSMEUG00000010618 Macropus eugenii ENSMEUG00000010618 I
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I
ENSMEUG00000014270 Macropus eugenii ENSMEUG00000014270 I
ENSMGAG00000007210 Meleagris gallopavo ENSMGAG00000007210 I
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I
MYF6 Microcebus murinus ENSMICG00000004274 I
MYOD1 Microcebus murinus ENSMICG00000005566 I
ENSMICG00000011211 Microcebus murinus ENSMICG00000011211 I
MYF6 Myotis lucifugus ENSMLUG00000004940 I
MYF5 Myotis lucifugus ENSMLUG00000004943 I
MYOD1 Myotis lucifugus ENSMLUG00000007940 I
MYOD1 Macaca mulatta ENSMMUG00000006400 I
MYF6 Macaca mulatta ENSMMUG00000011667 I
MYF5 Macaca mulatta ENSMMUG00000011669 I
MYOD1 Monodelphis domestica ENSMODG00000006749 I
MYF6 Monodelphis domestica ENSMODG00000020477 I
MYF5 Monodelphis domestica ENSMODG00000020478 I
ENSMPUG00000004935 Mustela putorius furo ENSMPUG00000004935 I
ENSMPUG00000004945 Mustela putorius furo ENSMPUG00000004945 I
ENSMPUG00000013563 Mustela putorius furo ENSMPUG00000013563 I
Myf5 Mus musculus ENSMUSG00000000435 D
Myod1 Mus musculus ENSMUSG00000009471 D
Myf6 Mus musculus ENSMUSG00000035923 D
ENSNLEG00000005194 Nomascus leucogenys ENSNLEG00000005194 I
ENSNLEG00000005207 Nomascus leucogenys ENSNLEG00000005207 I
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I
MYF6 Ornithorhynchus anatinus ENSOANG00000004854 I
ENSOARG00000015145 Ovis aries ENSOARG00000015145 I
ENSOARG00000015159 Ovis aries ENSOARG00000015159 I
ENSOARG00000025174 Ovis aries ENSOARG00000025174 I
MYF6 Oryctolagus cuniculus ENSOCUG00000001457 I
MYF5 Oryctolagus cuniculus ENSOCUG00000025477 I
MYF6 Otolemur garnettii ENSOGAG00000001038 I
MYF5 Otolemur garnettii ENSOGAG00000001039 I
MYOD1 Otolemur garnettii ENSOGAG00000029784 I
ENSONIG00000000007 Oreochromis niloticus ENSONIG00000000007 I
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I
ENSONIG00000007897 Oreochromis niloticus ENSONIG00000007897 I
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I
MYOD1 Ochotona princeps ENSOPRG00000002390 I
MYF5 Ochotona princeps ENSOPRG00000009007 I
myod1 Oryzias latipes ENSORLG00000000694 I
myf5 Oryzias latipes ENSORLG00000016257 I
myf6 Oryzias latipes ENSORLG00000016261 I
ENSP00000228641 Macaca fascicularis ENSP00000228641 I
ENSP00000228641-D1 Bos grunniens ENSP00000228641-D1 I
ENSP00000228644 Macaca fascicularis ENSP00000228644 I
ENSPANG00000007910 Papio anubis ENSPANG00000007910 I
ENSPANG00000011946 Papio anubis ENSPANG00000011946 I
ENSPANG00000020394 Papio anubis ENSPANG00000020394 I
MYOD1 Procavia capensis ENSPCAG00000001317 I
MYF6 Procavia capensis ENSPCAG00000001692 I
MYF5 Procavia capensis ENSPCAG00000001722 I
ENSPFOG00000009843 Poecilia formosa ENSPFOG00000009843 I
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I
ENSPFOG00000017498 Poecilia formosa ENSPFOG00000017498 I
ENSPPYG00000003449 Pongo abelii ENSPPYG00000003449 I
ENSPPYG00000004799 Pongo abelii ENSPPYG00000004799 I
ENSPPYG00000004800 Pongo abelii ENSPPYG00000004800 I
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I
ENSPSIG00000012468 Pelodiscus sinensis ENSPSIG00000012468 I
MYOD1 Pan troglodytes ENSPTRG00000003406 I
MYF6 Pan troglodytes ENSPTRG00000005260 I
MYF5 Pan troglodytes ENSPTRG00000005261 I
MYF6 Pteropus vampyrus ENSPVAG00000003335 I
MYF5 Pteropus vampyrus ENSPVAG00000003336 I
MYOD1 Pteropus vampyrus ENSPVAG00000012829 I
Myf5 Rattus norvegicus ENSRNOG00000004768 I
Myf6 Rattus norvegicus ENSRNOG00000004878 I
Myod1 Rattus norvegicus ENSRNOG00000011306 I
ENSSARG00000002401 Sorex araneus ENSSARG00000002401 I
MYF6 Sorex araneus ENSSARG00000008211 I
MYF5 Sorex araneus ENSSARG00000008217 I
ENSSHAG00000013331 Sarcophilus harrisii ENSSHAG00000013331 I
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I
ENSSHAG00000017220 Sarcophilus harrisii ENSSHAG00000017220 I
MYF5 Sus scrofa ENSSSCG00000000937 I
MYOD1 Sus scrofa ENSSSCG00000013375 I
MYF6 Sus scrofa ENSSSCG00000026533 I
ENSSTOG00000011556 Ictidomys tridecemlineatus ENSSTOG00000011556 I
ENSSTOG00000015808 Ictidomys tridecemlineatus ENSSTOG00000015808 I
ENSSTOG00000015810 Ictidomys tridecemlineatus ENSSTOG00000015810 I
MYOD1 Tupaia belangeri ENSTBEG00000003438 I
MYF5 Tupaia belangeri ENSTBEG00000008363 I
MYF6 Taeniopygia guttata ENSTGUG00000007751 I
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I
MYOD1 Taeniopygia guttata ENSTGUG00000008814 I
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I
myf5 Tetraodon nigroviridis ENSTNIG00000011406 I
myf6 Tetraodon nigroviridis ENSTNIG00000011407 I
myod1 Tetraodon nigroviridis ENSTNIG00000018793 I
myf5 Takifugu rubripes ENSTRUG00000010781 I
myf6 Takifugu rubripes ENSTRUG00000010842 I
myod2 Takifugu rubripes ENSTRUG00000014891 I
myod1 Takifugu rubripes ENSTRUG00000016609 I
ENSTSYG00000003275 Tarsius syrichta ENSTSYG00000003275 I
ENSTSYG00000003282 Tarsius syrichta ENSTSYG00000003282 I
MYOD1 Tursiops truncatus ENSTTRG00000013869 I
MYF6 Tursiops truncatus ENSTTRG00000014689 I
MYF5 Tursiops truncatus ENSTTRG00000014691 I
MYF6 Vicugna pacos ENSVPAG00000001926 I
MYF5 Vicugna pacos ENSVPAG00000001927 I
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I
ENSXMAG00000009780 Xiphophorus maculatus ENSXMAG00000009780 I
ENSXMAG00000017492 Xiphophorus maculatus ENSXMAG00000017492 I
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I
Gfo_R003967 Geospiza fortis Gfo_R003967 I
Gfo_R009107 Geospiza fortis Gfo_R009107 I
Myotis_brandtii_MYF5_10034131 Myotis brandtii Myotis_brandtii_MYF5_10034131 I
Myotis_brandtii_MYF6_10034130 Myotis brandtii Myotis_brandtii_MYF6_10034130 I
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I
Ogr16343 Ophisaurus gracilis Ogr16343 I
Pvit_01710 Pogona vitticeps Pvit_01710 I
Pvit_10244 Pogona vitticeps Pvit_10244 I
RPRC009735 Rhodnius prolixus RPRC009735 I
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I
myod1 Xenopus tropicalis XB-GENE-1017498 I
myod1.S Xenopus laevis XB-GENE-1017506 I
myf5 Xenopus tropicalis XB-GENE-493550 I
myf6.L Xenopus laevis XB-GENE-6252334 I
myod1.L Xenopus laevis XB-GENE-6252600 I
myf5.L Xenopus laevis XB-GENE-866267 I
myf6 Xenopus tropicalis XB-GENE-998203 I
myf6.S Xenopus laevis XB-GENE-998208 I