CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava37862.valid.m1
(
Manihot esculenta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
cassava37862.valid.m1
T048073_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.914
0.898
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava37862.valid.m1
bHLH
84
132
SKSHSQAEKRRRDRINAQLGILRKLIPKSDKMDKAALLGSVIDQVRDLK
Links
Other
bHLH
family TFs
Other
Manihot esculenta
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KUCA_T00003566001
Kuraishia capsulata
KUCA_T00003566001
N
PV04_07688
Capronia semiimmersa
PV04_07688
N
PV07_11610
Cladophialophora immunda
PV07_11610
N
SNOG_09007
Stagonospora nodorum
SNOG_09007
N
VHEMI03215
Torrubiella hemipterigena
VHEMI03215
N