estExt_genewise1_human.C_chr_5.10129 (Pichia stipitis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_genewise1_human.C_chr_5.10129 T048468_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01871
M01761_2.00 		Neurospora crassa
DNNDNNHNNH
DNNDNNHNNH		 PBM
Weirauch et al.(2014)
pTH8618 		0.841 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_genewise1_human.C_chr_5.10129 bHLH 170 239

Links

Other bHLH family TFs
Other Pichia stipitis TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1 N
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0 N
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0 N
maker-nMf.1.1.scaf00198-snap-gene-0.24 Meloidogyne floridensis maker-nMf.1.1.scaf00198-snap-gene-0.24 N
maker-nMf.1.1.scaf03265-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03265-augustus-gene-0.7 N
maker-nMf.1.1.scaf04006-snap-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf04006-snap-gene-0.9 N
maker-nMf.1.1.scaf06148-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06148-augustus-gene-0.3 N
maker-nMf.1.1.scaf06196-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf06196-snap-gene-0.8 N
maker-nMf.1.1.scaf08255-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf08255-snap-gene-0.4 N
maker-nMf.1.1.scaf11763-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11763-augustus-gene-0.3 N
maker-nMf.1.1.scaf12853-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf12853-augustus-gene-0.4 N
maker-nMf.1.1.scaf14574-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf14574-augustus-gene-0.4 N
maker-nMf.1.1.scaf15444-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf15444-snap-gene-0.4 N
maker-nMf.1.1.scaf16687-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16687-augustus-gene-0.4 N
MhA1_Contig1386.frz3.gene10 Meloidogyne hapla MhA1_Contig1386.frz3.gene10 N
MhA1_Contig2339.frz3.gene1 Meloidogyne hapla MhA1_Contig2339.frz3.gene1 N
MhA1_Contig2339.frz3.gene2 Meloidogyne hapla MhA1_Contig2339.frz3.gene2 N
MhA1_Contig41.frz3.gene12 Meloidogyne hapla MhA1_Contig41.frz3.gene12 N
MhA1_Contig790.frz3.gene2 Meloidogyne hapla MhA1_Contig790.frz3.gene2 N
MhA1_Contig790.frz3.gene5 Meloidogyne hapla MhA1_Contig790.frz3.gene5 N
Minc02050 Meloidogyne incognita Minc02050 N
Minc02054 Meloidogyne incognita Minc02054 N
Minc02055 Meloidogyne incognita Minc02055 N
Minc03976 Meloidogyne incognita Minc03976 N
Minc04725 Meloidogyne incognita Minc04725 N
Minc07962 Meloidogyne incognita Minc07962 N
Minc07964 Meloidogyne incognita Minc07964 N
Minc08183 Meloidogyne incognita Minc08183 N
Minc09138 Meloidogyne incognita Minc09138 N
Minc09140 Meloidogyne incognita Minc09140 N
Minc09142 Meloidogyne incognita Minc09142 N
Minc09143 Meloidogyne incognita Minc09143 N
Minc13321 Meloidogyne incognita Minc13321 N
Minc13448 Meloidogyne incognita Minc13448 N
Minc14854 Meloidogyne incognita Minc14854 N
Minc15187 Meloidogyne incognita Minc15187 N
Minc15189 Meloidogyne incognita Minc15189 N
Minc17464 Meloidogyne incognita Minc17464 N
Minc17667 Meloidogyne incognita Minc17667 N
Minc18661 Meloidogyne incognita Minc18661 N
Minc18991 Meloidogyne incognita Minc18991 N
snap_masked-nMf.1.1.scaf04875-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf04875-processed-gene-0.3 N