augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1 T308196_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1-mRNA-1 Nuclear receptor 67 119

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc02055 Meloidogyne incognita Minc02055 N 0.952
Minc09142 Meloidogyne incognita Minc09142 N 0.952
Minc09143 Meloidogyne incognita Minc09143 N 0.952
maker-nMf.1.1.scaf06148-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06148-augustus-gene-0.3 N 0.952
maker-nMf.1.1.scaf06884-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf06884-augustus-gene-0.5 N 0.952
snap_masked-nMf.1.1.scaf04875-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf04875-processed-gene-0.3 N 0.945
Minc15187 Meloidogyne incognita Minc15187 N 0.935
Minc07962 Meloidogyne incognita Minc07962 N 0.932
Minc07964 Meloidogyne incognita Minc07964 N 0.932
maker-nMf.1.1.scaf16687-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16687-augustus-gene-0.4 N 0.926
Minc02054 Meloidogyne incognita Minc02054 N 0.918
Minc09140 Meloidogyne incognita Minc09140 N 0.918
Minc15189 Meloidogyne incognita Minc15189 N 0.913
maker-nMf.1.1.scaf04006-snap-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf04006-snap-gene-0.9 N 0.900
maker-nMf.1.1.scaf12853-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf12853-augustus-gene-0.4 N 0.794
augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0 N 0.773
Minc04725 Meloidogyne incognita Minc04725 N 0.751
maker-nMf.1.1.scaf06196-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf06196-snap-gene-0.8 N 0.751