MDP0000275844 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000275844 T050415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.911 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000275844 bHLH 116 166

Links

Other bHLH family TFs
Other Malus domestica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29677.m000183 Ricinus communis 29677.m000183 I
30076.m004464 Ricinus communis 30076.m004464 I
30171.m000418 Ricinus communis 30171.m000418 I
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I
AMTR_s00044p00072910 Amborella trichopoda AMTR_s00044p00072910 I
Aquca_002_01329 Aquilegia coerulea Aquca_002_01329 I
Aquca_013_00001 Aquilegia coerulea Aquca_013_00001 I
LHY Arabidopsis thaliana AT1G01060 D
RVE7 Arabidopsis thaliana AT1G18330 D
CCA1 Arabidopsis thaliana AT2G46830 D
RVE7L Arabidopsis thaliana AT3G10113 D
RVE1 Arabidopsis thaliana AT5G17300 D
RVE2 Arabidopsis thaliana AT5G37260 I
BGIOSGA005828 Oryza indica BGIOSGA005828 I
BGIOSGA020501 Oryza indica BGIOSGA020501 I
BGIOSGA028019 Oryza indica BGIOSGA028019 I
Bo2g013560 Brassica oleracea Bo2g013560 I
Bo3g001090 Brassica oleracea Bo3g001090 I
Bo3g012470 Brassica oleracea Bo3g012470 I
Bo4g006930 Brassica oleracea Bo4g006930 I
Bo5g002760 Brassica oleracea Bo5g002760 I
Bo5g025310 Brassica oleracea Bo5g025310 I
Bo6g057640 Brassica oleracea Bo6g057640 I
Bo9g003580 Brassica oleracea Bo9g003580 I
Bo9g161410 Brassica oleracea Bo9g161410 I
Bostr.10064s0009 Boechera stricta Bostr.10064s0009 I
Bostr.25993s0083 Boechera stricta Bostr.25993s0083 I
Bostr.2618s0066 Boechera stricta Bostr.2618s0066 I
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I
Bra004503 Brassica rapa Bra004503 I
Bra006394 Brassica rapa Bra006394 I
Bra008563 Brassica rapa Bra008563 I
Bra023610 Brassica rapa Bra023610 I
Bra025914 Brassica rapa Bra025914 I
Bra030496 Brassica rapa Bra030496 I
Bra033291 Brassica rapa Bra033291 I
Bra037365 Brassica rapa Bra037365 I
Bra039503 Brassica rapa Bra039503 I
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I
BRADI5G19380 Brachypodium distachyon BRADI5G19380 I
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I
Cagra.4849s0004 Capsella grandiflora Cagra.4849s0004 I
Cagra.6594s0025 Capsella grandiflora Cagra.6594s0025 I
Carubv10001147m.g Capsella rubella Carubv10001147m.g I
Carubv10001399m.g Capsella rubella Carubv10001399m.g I
Carubv10005376m.g Capsella rubella Carubv10005376m.g I
Carubv10008551m.g Capsella rubella Carubv10008551m.g I
Carubv10009624m.g Capsella rubella Carubv10009624m.g I
Carubv10022831m.g Capsella rubella Carubv10022831m.g I
cassava33517.m1 Manihot esculenta cassava33517.m1 I
cassava35529.valid.m1 Manihot esculenta cassava35529.valid.m1 I
cassava35530.valid.m1 Manihot esculenta cassava35530.valid.m1 I
cassava35531.valid.m1 Manihot esculenta cassava35531.valid.m1 I
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I
Ca_14385 Cicer arietinum Ca_14385 I
Ca_18030 Cicer arietinum Ca_18030 I
CHLREDRAFT_112628 Chlamydomonas reinhardtii CHLREDRAFT_112628 I
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I
Ciclev10011554m.g Citrus clementina Ciclev10011554m.g I
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I
Cla009284 Citrullus lanatus Cla009284 I
Cla018914 Citrullus lanatus Cla018914 I
CMK043C Cyanidioschyzon merolae CMK043C I
Cucsa.112530 Cucumis sativus Cucsa.112530 I
Cucsa.278220 Cucumis sativus Cucsa.278220 I
Cucsa.349800 Cucumis sativus Cucsa.349800 I
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I
estExt_genewise1.C_Chr_06.00010302 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010302 I
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I
Eucgr.F02906 Eucalyptus grandis Eucgr.F02906 I
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I
evm.TU.supercontig_178.22 Carica papaya evm.TU.supercontig_178.22 I
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I
F775_18043 Aegilops tauschii F775_18043 I
F775_23690 Aegilops tauschii F775_23690 I
F775_26024 Aegilops tauschii F775_26024 I
F775_27077 Aegilops tauschii F775_27077 I
LHY Arabidopsis lyrata fgenesh2_kg.1__131__AT1G01060.3 I
fgenesh2_kg.1__2004__AT1G18330.2 Arabidopsis lyrata fgenesh2_kg.1__2004__AT1G18330.2 I
RVE1 Arabidopsis lyrata fgenesh2_kg.6__1729__AT5G17300.1 I
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I
GLYMA02G40800 Glycine max GLYMA02G40800 I
GLYMA03G42260 Glycine max GLYMA03G42260 I
GLYMA07G05410 Glycine max GLYMA07G05410 I
GLYMA09G29800 Glycine max GLYMA09G29800 I
GLYMA11G33180 Glycine max GLYMA11G33180 I
GLYMA14G39130 Glycine max GLYMA14G39130 I
GLYMA16G01980 Glycine max GLYMA16G01980 I
GLYMA16G34340 Glycine max GLYMA16G34340 I
GLYMA18G05050 Glycine max GLYMA18G05050 I
GLYMA19G45030 Glycine max GLYMA19G45030 I
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I
GRMZM2G014902 Zea mays GRMZM2G014902 I
GRMZM2G029850 Zea mays GRMZM2G029850 I
GRMZM2G145041 Zea mays GRMZM2G145041 I
GRMZM2G170322 Zea mays GRMZM2G170322 I
GRMZM2G175265 Zea mays GRMZM2G175265 I
GRMZM2G181030 Zea mays GRMZM2G181030 I
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I
GSMUA_Achr8G13440_001 Musa acuminata GSMUA_Achr8G13440_001 I
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I
gw1.1.364.1 Volvox carteri gw1.1.364.1 I
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I
gw1.6.1363.1 Ostreococcus RCC809 gw1.6.1363.1 I
gw1.8.161.1 Volvox carteri gw1.8.161.1 I
gw1.9.308.1 Chlorella NC64A gw1.9.308.1 I
LjSGA_026437.1 Lotus japonicus LjSGA_026437.1 I
LPERR02G22990 Leersia perrieri LPERR02G22990 I
LPERR04G18770 Leersia perrieri LPERR04G18770 I
LPERR06G23620 Leersia perrieri LPERR06G23620 I
LPERR08G03480 Leersia perrieri LPERR08G03480 I
Lus10005134.g Linum usitatissimum Lus10005134.g I
Lus10010100.g Linum usitatissimum Lus10010100.g I
Lus10026365.g Linum usitatissimum Lus10026365.g I
Lus10030184.g Linum usitatissimum Lus10030184.g I
Lus10031322.g Linum usitatissimum Lus10031322.g I
Lus10031893.g Linum usitatissimum Lus10031893.g I
Lus10042292.g Linum usitatissimum Lus10042292.g I
MDP0000187927 Malus domestica MDP0000187927 I
MDP0000193097 Malus domestica MDP0000193097 I
MDP0000269098 Malus domestica MDP0000269098 I
MDP0000581293 Malus domestica MDP0000581293 I
MDP0000795432 Malus domestica MDP0000795432 I
MDP0000890154 Malus domestica MDP0000890154 I
mgf001364m Mimulus guttatus mgf001364m I
mgf011909m Mimulus guttatus mgf011909m I
mgf014004m Mimulus guttatus mgf014004m I
mgf021826m Mimulus guttatus mgf021826m I
MLOC_14118 Hordeum vulgare MLOC_14118 I
MLOC_57684 Hordeum vulgare MLOC_57684 I
MLOC_62877 Hordeum vulgare MLOC_62877 I
MTR_3g064500 Medicago truncatula MTR_3g064500 I
MTR_5g076960 Medicago truncatula MTR_5g076960 I
MTR_6g477860 Medicago truncatula MTR_6g477860 I
MTR_7g118330 Medicago truncatula MTR_7g118330 I
OB02G35470 Oryza brachyantha OB02G35470 I
OB04G29880 Oryza brachyantha OB04G29880 I
OB06G35920 Oryza brachyantha OB06G35920 I
OB08G13700 Oryza brachyantha OB08G13700 I
OBART02G28240 Oryza barthii OBART02G28240 I
OBART04G23030 Oryza barthii OBART04G23030 I
OBART06G28140 Oryza barthii OBART06G28140 I
OGLUM02G28780 Oryza glumaepatula OGLUM02G28780 I
OGLUM04G22920 Oryza glumaepatula OGLUM04G22920 I
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I
OLONG_000103 Oryza longistaminata OLONG_000103 I
OLONG_003280 Oryza longistaminata OLONG_003280 I
OLONG_007470 Oryza longistaminata OLONG_007470 I
OLONG_010266 Oryza longistaminata OLONG_010266 I
OMERI02G27330 Oryza meridionalis OMERI02G27330 I
OMERI04G19240 Oryza meridionalis OMERI04G19240 I
OMERI06G28070 Oryza meridionalis OMERI06G28070 I
OMERI08G03470 Oryza meridionalis OMERI08G03470 I
ONIVA04G22180 Oryza nivara ONIVA04G22180 I
ONIVA06G31120 Oryza nivara ONIVA06G31120 I
ONIVA08G03410 Oryza nivara ONIVA08G03410 I
ONIVA09G03730 Oryza nivara ONIVA09G03730 I
OPUNC02G25920 Oryza punctata OPUNC02G25920 I
OPUNC04G20560 Oryza punctata OPUNC04G20560 I
OPUNC06G25680 Oryza punctata OPUNC06G25680 I
OPUNC08G03280 Oryza punctata OPUNC08G03280 I
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I
orange1.1g012625m.g Citrus sinensis orange1.1g012625m.g I
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I
ORGLA02G0242600 Oryza glaberrima ORGLA02G0242600 I
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I
ORUFI02G29720 Oryza rufipogon ORUFI02G29720 I
ORUFI04G24740 Oryza rufipogon ORUFI04G24740 I
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I
OS02G0685200 Oryza sativa OS02G0685200 I
OS04G0583900 Oryza sativa OS04G0583900 I
OS06G0728700 Oryza sativa OS06G0728700 I
OS08G0157600 Oryza sativa OS08G0157600 D
OSTLU_5960 Ostreococcus lucimarinus OSTLU_5960 I
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I
Pavir.Gb00859 Panicum virgatum Pavir.Gb00859 I
Pavir.J00602 Panicum virgatum Pavir.J00602 I
Pavir.J10427 Panicum virgatum Pavir.J10427 I
Pavir.J34894 Panicum virgatum Pavir.J34894 I
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I
PGSC0003DMG400021459 Solanum tuberosum PGSC0003DMG400021459 I
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I
PK02302.1 Cannabis sativa PK02302.1 I
PK08316.1 Cannabis sativa PK08316.1 D
PK20866.1 Cannabis sativa PK20866.1 I
PK28456.1 Cannabis sativa PK28456.1 I
Pm012998 Prunus mume Pm012998 I
Pm025253 Prunus mume Pm025253 I
Pm028731 Prunus mume Pm028731 I
Pm028732 Prunus mume Pm028732 I
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I
POPTR_0004s07270 Populus trichocarpa POPTR_0004s07270 I
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I
POPTR_0014s10240 Populus trichocarpa POPTR_0014s10240 I
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I
POPTR_0017s01380 Populus trichocarpa POPTR_0017s01380 I
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I
PRUPE_ppa004107mg Prunus persica PRUPE_ppa004107mg I
PRUPE_ppa005083mg Prunus persica PRUPE_ppa005083mg I
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I
SapurV1A.0147s0490 Salix purpurea SapurV1A.0147s0490 I
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I
SapurV1A.0985s0170 Salix purpurea SapurV1A.0985s0170 I
Sb04g031590 Sorghum bicolor Sb04g031590 I
Sb06g026500 Sorghum bicolor Sb06g026500 I
Sb07g003870 Sorghum bicolor Sb07g003870 I
Sb10g030960 Sorghum bicolor Sb10g030960 I
CCA1 Arabidopsis lyrata scaffold_403655.1 I
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I
SELMODRAFT_78481 Selaginella moellendorffii SELMODRAFT_78481 I
Si006457m.g Setaria italica Si006457m.g I
Si010077m.g Setaria italica Si010077m.g I
Si014685m.g Setaria italica Si014685m.g I
Si017289m.g Setaria italica Si017289m.g I
Solyc02g036370.2 Solanum lycopersicum Solyc02g036370.2 I
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I
TCM_005021 Theobroma cacao TCM_005021 I
TCM_013400 Theobroma cacao TCM_013400 I
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I
Thhalv10013821m.g Eutrema salsugineum Thhalv10013821m.g I
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I
Thhalv10028806m.g Eutrema salsugineum Thhalv10028806m.g I
Traes_2AL_660616C44 Triticum aestivum Traes_2AL_660616C44 I
Traes_2BL_3041037F1 Triticum aestivum Traes_2BL_3041037F1 I
Traes_2DL_31EED5C94 Triticum aestivum Traes_2DL_31EED5C94 I
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I
TRIUR3_01040 Triticum urartu TRIUR3_01040 I
TRIUR3_13396 Triticum urartu TRIUR3_13396 I
RVE1 Vitis vinifera VIT_04s0079g00410 I
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I
VIT_16s0050g01180 Vitis vinifera VIT_16s0050g01180 I