Si010077m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si010077m.g T279746_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RVE7
M01069_2.00
Arabidopsis thaliana
NDHRWATCNN

NNGATWYDHN
PBM
Sullivan et al.(2014)
pTH7081
0.734 0.761
RVE7
M02286_2.00
Arabidopsis thaliana
NDARTATCH

DGATAYTHN
PBM
Weirauch et al.(2014)
pTH7277
0.734 0.761
RVE7L
M07071_2.00
Arabidopsis thaliana
NNNNWAAATATCWNN

NNWGATATTTWNNNN
Dap-seq
OMalley et al.(2016)
AT3G10113_col_a
0.734 0.761
RVE7
M07008_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
EPR1_colamp_a
0.734 0.761
RVE7
M07009_2.00
Arabidopsis thaliana
NWAAATATCTHN

NDAGATATTTWN
Dap-seq
OMalley et al.(2016)
EPR1_col
0.734 0.761
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.729 0.739
LHY
M06997_2.00
Arabidopsis thaliana
NWAAATATCT

AGATATTTWN
Dap-seq
OMalley et al.(2016)
LHY1_col_a
0.716 0.804
LHY
M06998_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LHY1_colamp_a
0.716 0.804
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.709 0.783
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.709 0.783
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.709 0.783
OS08G0157600
M02330_2.00
Oryza sativa
DNRTATCHN

NDGATAYNH
PBM
Weirauch et al.(2014)
pTH7793
0.707 0.761
CCA1
M00875_2.00
Arabidopsis thaliana
NDNRWATCN

NGATWYNHN
PBM
Franco-Zorrilla et al.(2014)
CCA1
0.661 0.696
CCA1
M11039_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CCA1_Q5
0.661 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si010077m Myb 59 104

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sb06g026500 Sorghum bicolor Sb06g026500 I 0.909
Pavir.Gb00859 Panicum virgatum Pavir.Gb00859 I 0.909
Pavir.J10427 Panicum virgatum Pavir.J10427 I 0.909
GRMZM2G181030 Zea mays GRMZM2G181030 I 0.881
BGIOSGA014483 Oryza indica BGIOSGA014483 I 0.838
LPERR04G18770 Leersia perrieri LPERR04G18770 I 0.838
OB04G29880 Oryza brachyantha OB04G29880 I 0.838
OBART04G23030 Oryza barthii OBART04G23030 I 0.838
OGLUM04G22920 Oryza glumaepatula OGLUM04G22920 I 0.838
OLONG_010266 Oryza longistaminata OLONG_010266 I 0.838
OMERI04G19240 Oryza meridionalis OMERI04G19240 I 0.838
ONIVA04G22180 Oryza nivara ONIVA04G22180 I 0.838
OPUNC04G20560 Oryza punctata OPUNC04G20560 I 0.838
ORUFI04G24740 Oryza rufipogon ORUFI04G24740 I 0.838
OS04G0583900 Oryza sativa OS04G0583900 I 0.838
BRADI5G19380 Brachypodium distachyon BRADI5G19380 I 0.816
F775_27077 Aegilops tauschii F775_27077 I 0.816
Traes_2AL_660616C44 Triticum aestivum Traes_2AL_660616C44 I 0.816
Traes_2BL_3041037F1 Triticum aestivum Traes_2BL_3041037F1 I 0.816
Traes_2DL_31EED5C94 Triticum aestivum Traes_2DL_31EED5C94 I 0.816
MLOC_62877 Hordeum vulgare MLOC_62877 I 0.798
GSMUA_Achr8G13440_001 Musa acuminata GSMUA_Achr8G13440_001 I 0.790
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.789
F775_18043 Aegilops tauschii F775_18043 I 0.789
Si017289m.g Setaria italica Si017289m.g I 0.789
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.789
BGIOSGA005828 Oryza indica BGIOSGA005828 I 0.785
OBART02G28240 Oryza barthii OBART02G28240 I 0.785
OGLUM02G28780 Oryza glumaepatula OGLUM02G28780 I 0.785
OLONG_003280 Oryza longistaminata OLONG_003280 I 0.785
OMERI02G27330 Oryza meridionalis OMERI02G27330 I 0.785
ONIVA09G03730 Oryza nivara ONIVA09G03730 I 0.785
ORGLA02G0242600 Oryza glaberrima ORGLA02G0242600 I 0.785
ORUFI02G29720 Oryza rufipogon ORUFI02G29720 I 0.785
OS02G0685200 Oryza sativa OS02G0685200 I 0.785
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.771
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.771
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.771
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I 0.761
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I 0.761
BGIOSGA020501 Oryza indica BGIOSGA020501 I 0.755
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.755
F775_23690 Aegilops tauschii F775_23690 I 0.755
GRMZM2G145041 Zea mays GRMZM2G145041 I 0.755
LPERR06G23620 Leersia perrieri LPERR06G23620 I 0.755
OB06G35920 Oryza brachyantha OB06G35920 I 0.755
OBART06G28140 Oryza barthii OBART06G28140 I 0.755
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I 0.755
OLONG_007470 Oryza longistaminata OLONG_007470 I 0.755
OMERI06G28070 Oryza meridionalis OMERI06G28070 I 0.755
ONIVA06G31120 Oryza nivara ONIVA06G31120 I 0.755
OPUNC06G25680 Oryza punctata OPUNC06G25680 I 0.755
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I 0.755
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I 0.755
OS06G0728700 Oryza sativa OS06G0728700 I 0.755
Sb10g030960 Sorghum bicolor Sb10g030960 I 0.755
Si006457m.g Setaria italica Si006457m.g I 0.755
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I 0.755
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I 0.755
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I 0.755
TRIUR3_01040 Triticum urartu TRIUR3_01040 I 0.755
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I 0.755
gw1.6.1363.1 Ostreococcus RCC809 gw1.6.1363.1 I 0.753
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I 0.753
Bo5g025310 Brassica oleracea Bo5g025310 I 0.749
Bra025914 Brassica rapa Bra025914 I 0.749
Lus10026365.g Linum usitatissimum Lus10026365.g I 0.746
Lus10042292.g Linum usitatissimum Lus10042292.g I 0.746
RVE2 Arabidopsis thaliana AT5G37260 I 0.745
Bo6g057640 Brassica oleracea Bo6g057640 I 0.745
Bra039503 Brassica rapa Bra039503 I 0.745
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I 0.745
GLYMA09G29800 Glycine max GLYMA09G29800 I 0.745
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I 0.745
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I 0.745
Carubv10005376m.g Capsella rubella Carubv10005376m.g I 0.745
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I 0.745
GLYMA16G34340 Glycine max GLYMA16G34340 I 0.743
Bo9g161410 Brassica oleracea Bo9g161410 I 0.740
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.740
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.739
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I 0.739
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I 0.739
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I 0.739
AMTR_s00044p00072910 Amborella trichopoda AMTR_s00044p00072910 I 0.738
PGSC0003DMG400021459 Solanum tuberosum PGSC0003DMG400021459 I 0.738
POPTR_0004s07270 Populus trichocarpa POPTR_0004s07270 I 0.738
POPTR_0017s01380 Populus trichocarpa POPTR_0017s01380 I 0.738
PRUPE_ppa005083mg Prunus persica PRUPE_ppa005083mg I 0.738
Solyc02g036370.2 Solanum lycopersicum Solyc02g036370.2 I 0.738
RVE1 Vitis vinifera VIT_04s0079g00410 I 0.738
30171.m000418 Ricinus communis 30171.m000418 I 0.738
cassava33517.m1 Manihot esculenta cassava33517.m1 I 0.738
cassava35529.valid.m1 Manihot esculenta cassava35529.valid.m1 I 0.738
cassava35530.valid.m1 Manihot esculenta cassava35530.valid.m1 I 0.738
cassava35531.valid.m1 Manihot esculenta cassava35531.valid.m1 I 0.738
mgf011909m Mimulus guttatus mgf011909m I 0.738
Aquca_002_01329 Aquilegia coerulea Aquca_002_01329 I 0.738
Ciclev10011554m.g Citrus clementina Ciclev10011554m.g I 0.738
Eucgr.F02906 Eucalyptus grandis Eucgr.F02906 I 0.738
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.738
MDP0000187927 Malus domestica MDP0000187927 I 0.738
MDP0000581293 Malus domestica MDP0000581293 I 0.738
orange1.1g012625m.g Citrus sinensis orange1.1g012625m.g I 0.738
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.738
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.736
OB02G35470 Oryza brachyantha OB02G35470 I 0.736
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.736
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I 0.736
TCM_013400 Theobroma cacao TCM_013400 I 0.736
Cla018914 Citrullus lanatus Cla018914 I 0.736
Pm025253 Prunus mume Pm025253 I 0.736
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.736
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.736
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I 0.736
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I 0.736
MDP0000795432 Malus domestica MDP0000795432 I 0.736
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.736
PK28456.1 Cannabis sativa PK28456.1 I 0.736
MTR_5g076960 Medicago truncatula MTR_5g076960 I 0.735
RVE7 Arabidopsis thaliana AT1G18330 D 0.734
RVE7L Arabidopsis thaliana AT3G10113 D 0.734
fgenesh2_kg.1__2004__AT1G18330.2 Arabidopsis lyrata fgenesh2_kg.1__2004__AT1G18330.2 I 0.734
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.734
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.732
SapurV1A.0147s0490 Salix purpurea SapurV1A.0147s0490 I 0.732
SapurV1A.0985s0170 Salix purpurea SapurV1A.0985s0170 I 0.732
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.730
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I 0.730
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I 0.730
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I 0.730
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.730
MDP0000193097 Malus domestica MDP0000193097 I 0.730
PK08316.1 Cannabis sativa PK08316.1 D 0.729
OSTLU_5960 Ostreococcus lucimarinus OSTLU_5960 I 0.727
29677.m000183 Ricinus communis 29677.m000183 I 0.727
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.725
F775_26024 Aegilops tauschii F775_26024 I 0.725
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.725
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.725
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.725
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.725
OB08G13700 Oryza brachyantha OB08G13700 I 0.725
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.725
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.725
Si014685m.g Setaria italica Si014685m.g I 0.725
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.725
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.725
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.725
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.725
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.725
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.725
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I 0.724
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I 0.724
Carubv10009624m.g Capsella rubella Carubv10009624m.g I 0.724
Bo3g001090 Brassica oleracea Bo3g001090 I 0.723
MLOC_57684 Hordeum vulgare MLOC_57684 I 0.721
Pavir.J00602 Panicum virgatum Pavir.J00602 I 0.721
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I 0.716
LHY Arabidopsis thaliana AT1G01060 D 0.716
Bo5g002760 Brassica oleracea Bo5g002760 I 0.716
Bra033291 Brassica rapa Bra033291 I 0.716
GLYMA03G42260 Glycine max GLYMA03G42260 I 0.716
GLYMA07G05410 Glycine max GLYMA07G05410 I 0.716
GLYMA16G01980 Glycine max GLYMA16G01980 I 0.716
GLYMA19G45030 Glycine max GLYMA19G45030 I 0.716
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I 0.716
MTR_7g118330 Medicago truncatula MTR_7g118330 I 0.716
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I 0.716
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I 0.716
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I 0.716
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I 0.716
TCM_005021 Theobroma cacao TCM_005021 I 0.716
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I 0.716
Pm028731 Prunus mume Pm028731 I 0.716
30076.m004464 Ricinus communis 30076.m004464 I 0.716
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I 0.716
Cucsa.349800 Cucumis sativus Cucsa.349800 I 0.716
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.716
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.716
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.716
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I 0.716
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I 0.716
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I 0.716
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I 0.716
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I 0.716
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I 0.716
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I 0.716
PK20866.1 Cannabis sativa PK20866.1 I 0.716
mgf014004m Mimulus guttatus mgf014004m I 0.714
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I 0.714
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I 0.714
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I 0.714
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I 0.714
Lus10031322.g Linum usitatissimum Lus10031322.g I 0.712
Lus10031893.g Linum usitatissimum Lus10031893.g I 0.712
Pm012998 Prunus mume Pm012998 I 0.711
mgf001364m Mimulus guttatus mgf001364m I 0.710
RVE1 Arabidopsis thaliana AT5G17300 D 0.709
RVE1 Arabidopsis lyrata fgenesh2_kg.6__1729__AT5G17300.1 I 0.709
Bostr.2618s0066 Boechera stricta Bostr.2618s0066 I 0.709
Bra030496 Brassica rapa Bra030496 I 0.708
SELMODRAFT_78481 Selaginella moellendorffii SELMODRAFT_78481 I 0.708
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.707
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.707
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.707
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.707
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.707
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.707
OS08G0157600 Oryza sativa OS08G0157600 D 0.707
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.707
Ca_18030 Cicer arietinum Ca_18030 I 0.705
mgf021826m Mimulus guttatus mgf021826m I 0.705
GLYMA02G40800 Glycine max GLYMA02G40800 I 0.704
GLYMA11G33180 Glycine max GLYMA11G33180 I 0.704
GLYMA14G39130 Glycine max GLYMA14G39130 I 0.704
GLYMA18G05050 Glycine max GLYMA18G05050 I 0.704
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I 0.704
Ca_14385 Cicer arietinum Ca_14385 I 0.704
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I 0.704
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I 0.703
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I 0.703
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.701
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.701
Cla009284 Citrullus lanatus Cla009284 I 0.699
Cucsa.278220 Cucumis sativus Cucsa.278220 I 0.699
Cagra.4849s0004 Capsella grandiflora Cagra.4849s0004 I 0.698
Carubv10001147m.g Capsella rubella Carubv10001147m.g I 0.698
evm.TU.supercontig_178.22 Carica papaya evm.TU.supercontig_178.22 I 0.698
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I 0.698
LjSGA_026437.1 Lotus japonicus LjSGA_026437.1 I 0.695
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.692
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.684
Bo3g012470 Brassica oleracea Bo3g012470 I 0.682
MTR_6g477860 Medicago truncatula MTR_6g477860 I 0.682
PRUPE_ppa004107mg Prunus persica PRUPE_ppa004107mg I 0.682
Pm028732 Prunus mume Pm028732 I 0.682
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.682
Lus10010100.g Linum usitatissimum Lus10010100.g I 0.682
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.682
Bo2g013560 Brassica oleracea Bo2g013560 I 0.680
Bra008563 Brassica rapa Bra008563 I 0.680
Bra023610 Brassica rapa Bra023610 I 0.680
Thhalv10013821m.g Eutrema salsugineum Thhalv10013821m.g I 0.680
MTR_3g064500 Medicago truncatula MTR_3g064500 I 0.674
POPTR_0014s10240 Populus trichocarpa POPTR_0014s10240 I 0.669
MDP0000269098 Malus domestica MDP0000269098 I 0.669
MDP0000890154 Malus domestica MDP0000890154 I 0.669
Bra006394 Brassica rapa Bra006394 I 0.668
Bo4g006930 Brassica oleracea Bo4g006930 I 0.667
Bra004503 Brassica rapa Bra004503 I 0.667
estExt_genewise1.C_Chr_06.00010302 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010302 I 0.662
CCA1 Arabidopsis thaliana AT2G46830 D 0.661
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.661
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.661
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.661