orange1.1g024670m.g (Citrus sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 orange1.1g024670m.g T050575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.884 0.898
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g024670m bHLH 74 122
orange1.1g029383m bHLH 4 52

Links

Other bHLH family TFs
Other Citrus sinensis TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29900.m001610 Ricinus communis 29900.m001610 I 0.860
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.846
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.839
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.882
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.884
Ca_06386 Cicer arietinum Ca_06386 I 0.864
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.914
Cla013743 Citrullus lanatus Cla013743 I 0.840
Cla019977 Citrullus lanatus Cla019977 I 0.840
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.840
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.840
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.842
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.852
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.884
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.858
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.864
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.884
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.845
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.845
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.882
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.858
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.839
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.858
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.842
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.839
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.846
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.884
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.882
MDP0000249969 Malus domestica MDP0000249969 I 0.863
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.858
MTR_2g015890 Medicago truncatula MTR_2g015890 I 0.840
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.864
OB01G17480 Oryza brachyantha OB01G17480 I 0.846
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.846
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.846
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.846
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.846
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.846
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.846
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
OS01G0218100 Oryza sativa OS01G0218100 I 0.846
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.839
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.858
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.839
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.858
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
PK20225.1 Cannabis sativa PK20225.1 D 0.884
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.842
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.842
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.858
Si002517m.g Setaria italica Si002517m.g I 0.845
Si002655m.g Setaria italica Si002655m.g I 0.839
Si039730m.g Setaria italica Si039730m.g I 0.842
TCM_029711 Theobroma cacao TCM_029711 I 0.882
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.858
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.884