Cucsa.200860 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.200860 T048197_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.840 0.735
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.200860.1 bHLH 60 108

Links

Other bHLH family TFs
Other Cucumis sativus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla013743 Citrullus lanatus Cla013743 I 0.894
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.879
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.879
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.870
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.868
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.867
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.867
29646.m001078 Ricinus communis 29646.m001078 N 0.867
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.867
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.867
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.867
Ca_19863 Cicer arietinum Ca_19863 N 0.865
GLYMA12G14400 Glycine max GLYMA12G14400 N 0.865
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.865
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.865
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.854
PK25264.1 Cannabis sativa PK25264.1 N 0.853
Ca_02482 Cicer arietinum Ca_02482 N 0.852
MTR_2g091190 Medicago truncatula MTR_2g091190 N 0.852
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.848
Ciclev10016261m.g Citrus clementina Ciclev10016261m.g N 0.843
orange1.1g024326m.g Citrus sinensis orange1.1g024326m.g N 0.843
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.840
PK20225.1 Cannabis sativa PK20225.1 D 0.840
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.840
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.840
MTR_2g015890 Medicago truncatula MTR_2g015890 I 0.840
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.840
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.840
Ca_06386 Cicer arietinum Ca_06386 I 0.840
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.840
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.840
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.840