Pavir.J09493 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.J09493 T050877_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J09493.1.p bHLH 13 54

Links

Other bHLH family TFs
Other Panicum virgatum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ILI5 Oryza indica BGIOSGA005623 N 0.871
ILI4 Oryza indica BGIOSGA022576 N 0.902
BRADI1G45260 Brachypodium distachyon BRADI1G45260 N 0.871
BRADI3G59290 Brachypodium distachyon BRADI3G59290 N 0.871
F775_27240 Aegilops tauschii F775_27240 N 0.858
GRMZM2G036092 Zea mays GRMZM2G036092 N 0.877
LPERR02G26590 Leersia perrieri LPERR02G26590 N 0.871
LPERR06G07460 Leersia perrieri LPERR06G07460 N 0.902
MLOC_55094 Hordeum vulgare MLOC_55094 N 0.871
OB02G39450 Oryza brachyantha OB02G39450 N 0.868
OB06G17570 Oryza brachyantha OB06G17570 N 0.902
OBART02G32470 Oryza barthii OBART02G32470 N 0.871
OGLUM02G33100 Oryza glumaepatula OGLUM02G33100 N 0.871
OLONG_003198 Oryza longistaminata OLONG_003198 N 0.871
OMERI02G31120 Oryza meridionalis OMERI02G31120 N 0.871
OMERI06G09660 Oryza meridionalis OMERI06G09660 N 0.902
ONIVA06G04530 Oryza nivara ONIVA06G04530 N 0.871
ONIVA06G09300 Oryza nivara ONIVA06G09300 N 0.902
OPUNC02G30020 Oryza punctata OPUNC02G30020 N 0.871
OPUNC06G07810 Oryza punctata OPUNC06G07810 N 0.902
ORGLA02G0280200 Oryza glaberrima ORGLA02G0280200 N 0.871
ORGLA06G0076300 Oryza glaberrima ORGLA06G0076300 N 0.902
ORUFI02G34170 Oryza rufipogon ORUFI02G34170 N 0.871
ILI5 Oryza sativa OS02G0747900 N 0.871
ILI4 Oryza sativa OS06G0226500 N 0.902
Pavir.Ab02945 Panicum virgatum Pavir.Ab02945 N 0.877
Pavir.Db01746 Panicum virgatum Pavir.Db01746 N 0.890
Pavir.J39793 Panicum virgatum Pavir.J39793 N 0.877
Sb10g008000 Sorghum bicolor Sb10g008000 N 0.902
Si007662m.g Setaria italica Si007662m.g N 0.902
Traes_6DL_3F9FA4887 Triticum aestivum Traes_6DL_3F9FA4887 N 0.858
TRIUR3_29197 Triticum urartu TRIUR3_29197 N 0.860