Pavir.Db01746 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Db01746 T050731_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db01746.1.p bHLH 13 54

Links

Other bHLH family TFs
Other Panicum virgatum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ILI4 Oryza indica BGIOSGA022576 N 0.902
LPERR06G07460 Leersia perrieri LPERR06G07460 N 0.902
OB06G17570 Oryza brachyantha OB06G17570 N 0.902
OMERI06G09660 Oryza meridionalis OMERI06G09660 N 0.902
ONIVA06G09300 Oryza nivara ONIVA06G09300 N 0.902
OPUNC06G07810 Oryza punctata OPUNC06G07810 N 0.902
ORGLA06G0076300 Oryza glaberrima ORGLA06G0076300 N 0.902
ILI4 Oryza sativa OS06G0226500 N 0.902
Si007662m.g Setaria italica Si007662m.g N 0.902
Sb10g008000 Sorghum bicolor Sb10g008000 N 0.890
Pavir.J09493 Panicum virgatum Pavir.J09493 N 0.890
GRMZM2G036092 Zea mays GRMZM2G036092 N 0.878
Pavir.Ab02945 Panicum virgatum Pavir.Ab02945 N 0.878
Pavir.J39793 Panicum virgatum Pavir.J39793 N 0.878
ILI5 Oryza indica BGIOSGA005623 N 0.872
BRADI1G45260 Brachypodium distachyon BRADI1G45260 N 0.872
BRADI3G59290 Brachypodium distachyon BRADI3G59290 N 0.872
LPERR02G26590 Leersia perrieri LPERR02G26590 N 0.872
MLOC_55094 Hordeum vulgare MLOC_55094 N 0.872
OBART02G32470 Oryza barthii OBART02G32470 N 0.872
OGLUM02G33100 Oryza glumaepatula OGLUM02G33100 N 0.872
OLONG_003198 Oryza longistaminata OLONG_003198 N 0.872
OMERI02G31120 Oryza meridionalis OMERI02G31120 N 0.872
ONIVA06G04530 Oryza nivara ONIVA06G04530 N 0.872
OPUNC02G30020 Oryza punctata OPUNC02G30020 N 0.872
ORGLA02G0280200 Oryza glaberrima ORGLA02G0280200 N 0.872
ORUFI02G34170 Oryza rufipogon ORUFI02G34170 N 0.872
ILI5 Oryza sativa OS02G0747900 N 0.872
TRIUR3_29197 Triticum urartu TRIUR3_29197 N 0.872
F775_27240 Aegilops tauschii F775_27240 N 0.871
Traes_6DL_3F9FA4887 Triticum aestivum Traes_6DL_3F9FA4887 N 0.871
OB02G39450 Oryza brachyantha OB02G39450 N 0.869