hes4 (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-487830 T051806_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hes1
M01726_2.00 		Mus musculus
NVCACGYKNN
NNMRCGTGBN		 PBM
Weirauch et al.(2014)
pTH5059 		0.914 0.982
HES1
M04090_2.00 		Homo sapiens
VVCACGYGHM
KDCRCGTGBB		 SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX 		0.914 0.982
HES1
M09822_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q2 		0.914 0.982
HES1
M09823_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q3 		0.914 0.982
HES1
M09824_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q4 		0.914 0.982
HES1
M09825_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HES1_Q6 		0.914 0.982
HES1
M04091_2.00 		Homo sapiens
VNYACNYNHN
NDNRNGTRNB		 SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX 		0.914 0.982
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH59761 bHLH 35 92
CAJ82465 bHLH 35 92

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_19967 Ancylostoma duodenale ANCDUO_19967 N
ASIM_0001677501 Anisakis simplex ASIM_0001677501 N
ASU_12719 Ascaris suum ASU_12719 N
Bm3899 Brugia malayi Bm3899 N
BTMF_0001429501 Brugia timori BTMF_0001429501 N
BXY_0574800 Bursaphelenchus xylophilus BXY_0574800 N
CBG02231 Caenorhabditis briggsae CBG02231 N
CBN00758 Caenorhabditis brenneri CBN00758 N
CBN06012 Caenorhabditis brenneri CBN06012 N
CJA12147 Caenorhabditis japonica CJA12147 N
CRE29609 Caenorhabditis remanei CRE29609 N
EVEC_0000982901 Enterobius vermicularis EVEC_0000982901 N
GPUH_0002405001 Gongylonema pulchrum GPUH_0002405001 N
HCOI01584000 Haemonchus contortus HCOI01584000 N
L596_g21063 Steinernema carpocapsae L596_g21063 N
L889_g15246 Steinernema feltiae L889_g15246 N
L893_g5132 Steinernema glaseri L893_g5132 N
L898_g4344 Steinernema monticolum L898_g4344 N
LOAG_18157 Loa loa LOAG_18157 N
MhA1_Contig659.frz3.gene12 Meloidogyne hapla MhA1_Contig659.frz3.gene12 N
Minc00757 Meloidogyne incognita Minc00757 N
Minc01466 Meloidogyne incognita Minc01466 N
nAv.1.0.1.g02876 Acanthocheilonema viteae nAv.1.0.1.g02876 N
nDi.2.2.2.g08539 Dirofilaria immitis nDi.2.2.2.g08539 N
nOo.2.0.1.g06284 Onchocerca ochengi nOo.2.0.1.g06284 N
PEQ_0000361701 Parascaris equorum PEQ_0000361701 N
PTRK_0001052400 Parastrongyloides trichosuri PTRK_0001052400 N
SPAL_0000096300 Strongyloides papillosus SPAL_0000096300 N
SSTP_0000137400 Strongyloides stercoralis SSTP_0000137400 N
SVE_0382900 Strongyloides venezuelensis SVE_0382900 N
TCLT_0000822701 Thelazia callipaeda TCLT_0000822701 N
TCNE_0001786701 Toxocara canis TCNE_0001786701 N
TELCIR_17986 Teladorsagia circumcincta TELCIR_17986 N
TELCIR_20778 Teladorsagia circumcincta TELCIR_20778 N
tag-68 Caenorhabditis elegans WBGene00006445 N
WUBG_00492 Wuchereria bancrofti WUBG_00492 N