CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002405001
(
Gongylonema pulchrum
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
GPUH_0002405001
T325692_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002405001-mRNA-1
SMAD
127
229
KRAKRRFIRLLRAFDTEDLAAILKAVQSGGRDIKQCAPGPPMDVIEEMPGCSREGDLDDEEGSPERRYEDTGLIPQIDKPMSMPYLCCKLWRWKELQVLSFIV
Links
Other
SMAD
family TFs
Other
Gongylonema pulchrum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCLT_0000822701
Thelazia callipaeda
TCLT_0000822701
N
0.905
TCNE_0001786701
Toxocara canis
TCNE_0001786701
N
0.770
ASIM_0001677501
Anisakis simplex
ASIM_0001677501
N
0.743
nAv.1.0.1.g02876
Acanthocheilonema viteae
nAv.1.0.1.g02876
N
0.743
nDi.2.2.2.g08539
Dirofilaria immitis
nDi.2.2.2.g08539
N
0.743
nLs.2.1.2.g02844
Litomosoides sigmodontis
nLs.2.1.2.g02844
N
0.743
WUBG_00492
Wuchereria bancrofti
WUBG_00492
N
0.730
Bm3899
Brugia malayi
Bm3899
N
0.730
EVEC_0000982901
Enterobius vermicularis
EVEC_0000982901
N
0.730