CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g02844
(
Litomosoides sigmodontis
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
nLs.2.1.2.g02844
T325843_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t02844-RA
SMAD
32
168
EKRSRRRFNRLLRAFDTEDLAAILKAVESGGRDIKQCAPGPPMDIMEEMPGCSRDVAETDDDEGFLDHRYENTGLIPQIDKPMSIPYLCCKLWRWKELQVDAALHRLDPLPWCRFGRVTMNNATVSCCNPYHYALWI
Links
Other
SMAD
family TFs
Other
Litomosoides sigmodontis
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_00492
Wuchereria bancrofti
WUBG_00492
N
0.990
Bm3899
Brugia malayi
Bm3899
N
0.990
LOAG_18157
Loa loa
LOAG_18157
N
0.990
nAv.1.0.1.g02876
Acanthocheilonema viteae
nAv.1.0.1.g02876
N
0.990
nDi.2.2.2.g08539
Dirofilaria immitis
nDi.2.2.2.g08539
N
0.980
BTMF_0001429501
Brugia timori
BTMF_0001429501
N
0.975
TCNE_0001786701
Toxocara canis
TCNE_0001786701
N
0.931
EVEC_0000982901
Enterobius vermicularis
EVEC_0000982901
N
0.881
MhA1_Contig659.frz3.gene12
Meloidogyne hapla
MhA1_Contig659.frz3.gene12
N
0.873
PEQ_0000361701
Parascaris equorum
PEQ_0000361701
N
0.871
TCLT_0000822701
Thelazia callipaeda
TCLT_0000822701
N
0.871
ASIM_0001677501
Anisakis simplex
ASIM_0001677501
N
0.851
Minc00757
Meloidogyne incognita
Minc00757
N
0.839
L596_g21063
Steinernema carpocapsae
L596_g21063
N
0.812
L898_g4344
Steinernema monticolum
L898_g4344
N
0.812
nOo.2.0.1.g06284
Onchocerca ochengi
nOo.2.0.1.g06284
N
0.802
BXY_0574800
Bursaphelenchus xylophilus
BXY_0574800
N
0.797
HCOI01584000
Haemonchus contortus
HCOI01584000
N
0.792
L889_g15246
Steinernema feltiae
L889_g15246
N
0.792
L893_g5132
Steinernema glaseri
L893_g5132
N
0.792
PTRK_0001052400
Parastrongyloides trichosuri
PTRK_0001052400
N
0.792
SPAL_0000096300
Strongyloides papillosus
SPAL_0000096300
N
0.792
SSTP_0000137400
Strongyloides stercoralis
SSTP_0000137400
N
0.792
SVE_0382900
Strongyloides venezuelensis
SVE_0382900
N
0.792
Minc01466
Meloidogyne incognita
Minc01466
N
0.785
CBG02231
Caenorhabditis briggsae
CBG02231
N
0.782
CBN00758
Caenorhabditis brenneri
CBN00758
N
0.782
CBN06012
Caenorhabditis brenneri
CBN06012
N
0.782
CJA12147
Caenorhabditis japonica
CJA12147
N
0.782
CRE29609
Caenorhabditis remanei
CRE29609
N
0.782
tag-68
Caenorhabditis elegans
WBGene00006445
N
0.782
TELCIR_17986
Teladorsagia circumcincta
TELCIR_17986
N
0.782
GPUH_0002405001
Gongylonema pulchrum
GPUH_0002405001
N
0.743
ANCDUO_19967
Ancylostoma duodenale
ANCDUO_19967
N
0.723
ASU_12719
Ascaris suum
ASU_12719
N
0.723
TELCIR_20778
Teladorsagia circumcincta
TELCIR_20778
N
0.706