CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr1.CM0088.610.nd
(
Lotus japonicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
chr1.CM0088.610.nd
T052003_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr1.CM0088.610.nd
bHLH
159
202
VYARRRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQ
Links
Other
bHLH
family TFs
Other
Lotus japonicus
TFs
213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008417
Aedes aegypti
AAEL008417
N
0.000
AALB007196
Anopheles albimanus
AALB007196
N
0.000
AARA009694
Anopheles arabiensis
AARA009694
N
0.000
AATE006267
Anopheles atroparvus
AATE006267
N
0.000
ACAC_0000409101
Angiostrongylus cantonensis
ACAC_0000409101
N
0.000
ACEP12759
Atta cephalotes
ACEP12759
I
0.000
ACHR002403
Anopheles christyi
ACHR002403
N
0.000
ACOC_0001323101
Angiostrongylus costaricensis
ACOC_0001323101
N
0.000
ACOM033320
Anopheles coluzzii
ACOM033320
N
0.000
ACUA003510
Anopheles culicifacies
ACUA003510
N
0.000
ACYPI003297
Acyrthosiphon pisum
ACYPI003297
I
0.000
ADAC009894
Anopheles darlingi
ADAC009894
N
0.000
ADIR002941
Anopheles dirus
ADIR002941
N
0.000
AEPI008570
Anopheles epiroticus
AEPI008570
N
0.000
AFAF018499
Anopheles farauti
AFAF018499
N
0.000
AFUN011346
Anopheles funestus
AFUN011346
N
0.000
AGAP004110
Anopheles gambiae
AGAP004110
N
0.000
ALNC14_126360
Albugo laibachii
ALNC14_126360
N
0.000
ALUE_0001851001
Ascaris lumbricoides
ALUE_0001851001
N
0.000
AMEC005071
Anopheles melas
AMEC005071
N
0.000
AMEM002948
Anopheles merus
AMEM002948
N
0.000
AMIN003838
Anopheles minimus
AMIN003838
N
0.000
ANCCAN_29654
Ancylostoma caninum
ANCCAN_29654
N
0.000
ANCCEY_08672
Ancylostoma ceylanicum
ANCCEY_08672
N
0.000
AQUA009805
Anopheles quadriannulatus
AQUA009805
N
0.000
Aquca_004_00335
Aquilegia coerulea
Aquca_004_00335
I
0.000
ASIS023527
Anopheles sinensis
ASIS023527
N
0.000
ASTEI04275
Anopheles stephensi
ASTEI04275
N
0.000
ASU_10445
Ascaris suum
ASU_10445
N
0.000
BGIBMGA013514
Bombyx mori
BGIBMGA013514
N
0.000
CapteG224864
Capitella teleta
CapteG224864
I
0.000
CBN09380
Caenorhabditis brenneri
CBN09380
N
0.000
Cflo_06133--XP_394373.1_APIME
Camponotus floridanus
Cflo_06133--XP_394373.1_APIME
I
0.000
cgd2_870
Cryptosporidium parvum
cgd2_870
N
0.000
CGI_10019404
Crassostrea gigas
CGI_10019404
N
0.000
Chro.20098
Cryptosporidium hominis
Chro.20098
N
0.000
CJA05209
Caenorhabditis japonica
CJA05209
N
0.000
CLEC000086
Cimex lectularius
CLEC000086
N
0.000
CLEC002888
Cimex lectularius
CLEC002888
N
0.000
CMU_009510
Cryptosporidium muris
CMU_009510
N
0.000
CPIJ005084
Culex quinquefasciatus
CPIJ005084
N
0.000
CpipJ_CPIJ005084
Culex pipiens
CpipJ_CPIJ005084
N
0.000
CRE03905
Caenorhabditis remanei
CRE03905
N
0.000
D917_07703
Trichinella nativa
D917_07703
N
0.000
D918_07944
Trichuris suis
D918_07944
N
0.000
DAPPUDRAFT_303074
Daphnia pulex
DAPPUDRAFT_303074
N
0.000
DICVIV_03175
Dictyocaulus viviparus
DICVIV_03175
N
0.000
DILT_0001250601
Diphyllobothrium latum
DILT_0001250601
N
0.000
EFV51436
Trichinella spiralis
EFV51436
N
0.000
ENSCING00000023833
Ciona intestinalis
ENSCING00000023833
N
0.000
ccdc124
Oryzias latipes
ENSORLG00000015728
N
0.000
estExt_fgenesh1_kg.C_80399
Phytophthora capsici
estExt_fgenesh1_kg.C_80399
N
0.000
estExt_fgenesh2_pg.C_1070085
Branchiostoma floridae
estExt_fgenesh2_pg.C_1070085
N
0.000
estExt_fgenesh2_pm.C_3240002
Branchiostoma floridae
estExt_fgenesh2_pm.C_3240002
N
0.000
ETH_00032160
Eimeria tenella
ETH_00032160
N
0.000
F443_19335
Phytophthora parasitica
F443_19335
N
0.000
GH18160
Drosophila grimshawi
FBgn0125628
I
0.000
GK13574
Drosophila willistoni
FBgn0215582
I
0.000
GE25578
Drosophila yakuba
FBgn0242642
I
0.000
fgenesh1_pg.C_scaffold_73784000001
Phytophthora capsici
fgenesh1_pg.C_scaffold_73784000001
N
0.000
fgenesh1_pm.2_#_13
Coccomyxa subellipsoidea C169
fgenesh1_pm.2_#_13
N
0.000
fgeneshCV_pg.C_scaffold_2000022
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_2000022
N
0.000
fgenesh_scip_prom.28083.7036
Phytophthora lateralis
fgenesh_scip_prom.28083.7036
N
0.000
fgenesh_scip_prom.46568.2049
Phytophthora kernoviae
fgenesh_scip_prom.46568.2049
N
0.000
GB50764
Apis mellifera
GB50764
I
0.000
GPUH_0000676401
Gongylonema pulchrum
GPUH_0000676401
N
0.000
GUITHDRAFT_162866
Guillardia theta
GUITHDRAFT_162866
N
0.000
HCOI00594600
Haemonchus contortus
HCOI00594600
N
0.000
HelroG66455
Helobdella robusta
HelroG66455
N
0.000
HHAL005242-PA
Halyomorpha halys
HHAL005242-PA
I
0.000
HMEL009197
Heliconius melpomene
HMEL009197
N
0.000
HPBE_0001252601
Heligmosomoides bakeri
HPBE_0001252601
N
0.000
HPLM_0000348901
Haemonchus placei
HPLM_0000348901
N
0.000
Hsal_04778--XP_394373.1_APIME
Harpegnathos saltator
Hsal_04778--XP_394373.1_APIME
I
0.000
ISCW011313
Ixodes scapularis
ISCW011313
N
0.000
KGM_20190
Danaus plexippus
KGM_20190
I
0.000
LCUP006380
Lucilia cuprina
LCUP006380
N
0.000
LotgiG126557
Lottia gigantea
LotgiG126557
N
0.000
maker-nMf.1.1.scaf18285-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf18285-snap-gene-0.4
N
0.000
maker-pir_contig_430-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_430-fgenesh-gene-0.3
N
0.000
maker-piw_contig_1911-snap-gene-0.6
Pythium iwayamai
maker-piw_contig_1911-snap-gene-0.6
N
0.000
maker-pve_contig_105-snap-gene-0.29
Pythium vexans
maker-pve_contig_105-snap-gene-0.29
N
0.000
MCINX012524
Melitaea cinxia
MCINX012524
I
0.000
MDOA001488
Musca domestica
MDOA001488
I
0.000
MhA1_Contig1250.frz3.gene10
Meloidogyne hapla
MhA1_Contig1250.frz3.gene10
N
0.000
Minc12734
Meloidogyne incognita
Minc12734
N
0.000
ML11467a
Mnemiopsis leidyi
ML11467a
N
0.000
NBR_0000605501
Nippostrongylus brasiliensis
NBR_0000605501
N
0.000
NCLIV_051130
Neospora caninum
NCLIV_051130
N
0.000
NECAME_12352
Necator americanus
NECAME_12352
N
0.000
NEMVEDRAFT_v1g201358
Nematostella vectensis
NEMVEDRAFT_v1g201358
I
0.000
NV13812
Nasonia vitripennis
NV13812
I
0.000
O9G_000624
Rozella allomycis
O9G_000624
N
0.000
Ocbimv22013575m.g
Octopus bimaculoides
Ocbimv22013575m.g
I
0.000
OESDEN_05486
Oesophagostomum dentatum
OESDEN_05486
N
0.000
orange1.1g031906m.g
Citrus sinensis
orange1.1g031906m.g
I
0.000
PEQ_0000413701
Parascaris equorum
PEQ_0000413701
N
0.000
PHUM036320
Pediculus humanus
PHUM036320
N
0.000
Phyra74523
Phytophthora ramorum
Phyra74523
N
0.000
Physo132366
Phytophthora sojae
Physo132366
N
0.000
PYU1_G003004
Pythium ultimum
PYU1_G003004
N
0.000
RPRC009760
Rhodnius prolixus
RPRC009760
N
0.000
SBAD_0000307901
Soboliphyme baturini
SBAD_0000307901
N
0.000
SINV12391
Solenopsis invicta
SINV12391
I
0.000
SPRG_06372
Saprolegnia parasitica
SPRG_06372
N
0.000
SPU_001776
Strongylocentrotus purpuratus
SPU_001776
N
0.000
TC004658
Tribolium castaneum
TC004658
N
0.000
TCLT_0001081001
Thelazia callipaeda
TCLT_0001081001
N
0.000
TELCIR_11967
Teladorsagia circumcincta
TELCIR_11967
N
0.000
tetur18g00680
Tetranychus urticae
tetur18g00680
I
0.000
TGME49_037260
Toxoplasma gondii
TGME49_037260
N
0.000
TMUE_s0148001000
Trichuris muris
TMUE_s0148001000
N
0.000
TTRE_0000309701
Trichuris trichiura
TTRE_0000309701
N
0.000
Y73E7A.1
Caenorhabditis elegans
WBGene00022268
N
0.000