MCOS_0000389001 (Mesocestoides corti)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MCOS_0000389001 T054414_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.846 0.815
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.846 0.815
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.846 0.815
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.846 0.815
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.846 0.815
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.846 0.815
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.846 0.815
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.846 0.796
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.846 0.796
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.846 0.796
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.846 0.796
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.846 0.796
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.846 0.796
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.846 0.796
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.846 0.796
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCOS_0000389001-mRNA-1 bHLH 28 81

Links

Other bHLH family TFs
Other Mesocestoides corti TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I
B39674 Xenopus laevis B39674 I
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I
USF1 Bos taurus ENSBTAG00000017873 I
USF1 Canis familiaris ENSCAFG00000012689 I
USF1 Choloepus hoffmanni ENSCHOG00000011010 I
USF1 Callithrix jacchus ENSCJAG00000005396 I
USF1 Cavia porcellus ENSCPOG00000003957 I
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I
USF1 Equus caballus ENSECAG00000004755 I
USF1 Felis catus ENSFCAG00000012307 I
USF1 Homo sapiens ENSG00000158773 D
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I
USF1 Loxodonta africana ENSLAFG00000011338 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I
USF1 Microcebus murinus ENSMICG00000007199 I
USF1 Myotis lucifugus ENSMLUG00000009179 I
USF1 Macaca mulatta ENSMMUG00000002003 I
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I
USF1 Monodelphis domestica ENSMODG00000005443 I
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I
Usf1 Mus musculus ENSMUSG00000026641 D
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
USF1 Ochotona princeps ENSOPRG00000003858 I
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I
USF1 Pan troglodytes ENSPTRG00000001565 I
USF1 Pteropus vampyrus ENSPVAG00000005489 I
Usf1 Rattus norvegicus ENSRNOG00000004255 I
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I
USF1 Sus scrofa ENSSSCG00000006371 I
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I
USF1 Tupaia belangeri ENSTBEG00000003164 I
USF1 Tursiops truncatus ENSTTRG00000009151 I
USF1 Vicugna pacos ENSVPAG00000008421 I
Ogr08237 Ophisaurus gracilis Ogr08237 I
PHUM287950 Pediculus humanus PHUM287950 I
Pvit_07548 Pogona vitticeps Pvit_07548 I
usf1 Xenopus tropicalis XB-GENE-5918718 I
usf1.S Xenopus laevis XB-GENE-6255904 I