scaffold60-EXSNAP2012.12 (Pristionchus exspectatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 scaffold60-EXSNAP2012.12 T054850_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hlh-11
M00931_2.00 		Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT		 PBM
Grove et al.(2009)
HLH11 		0.890 0.865
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.879 0.808
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.879 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold60-EXSNAP2012.12 bHLH 39 90

Links

Other bHLH family TFs
Other Pristionchus exspectatus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001093601 Angiostrongylus cantonensis ACAC_0001093601 I 0.869
ACOC_0000846801 Angiostrongylus costaricensis ACOC_0000846801 I 0.869
AGAP010201 Anopheles gambiae AGAP010201 I 0.860
ANCCAN_04319 Ancylostoma caninum ANCCAN_04319 I 0.869
ANCCEY_00577 Ancylostoma ceylanicum ANCCEY_00577 I 0.869
ANCDUO_12144 Ancylostoma duodenale ANCDUO_12144 N 0.675
BGIBMGA010353 Bombyx mori BGIBMGA010353 I 0.890
Bm4538 Brugia malayi Bm4538 N 0.854
BTMF_0001307601 Brugia timori BTMF_0001307601 N 0.854
BXY_1142000 Bursaphelenchus xylophilus BXY_1142000 N 0.843
CBG10034 Caenorhabditis briggsae CBG10034 I 0.890
CBN22234 Caenorhabditis brenneri CBN22234 I 0.890
CGOC_0000858101 Cylicostephanus goldi CGOC_0000858101 I 0.869
CJA09019 Caenorhabditis japonica CJA09019 I 0.890
CRE25281 Caenorhabditis remanei CRE25281 I 0.890
DICVIV_02775 Dictyocaulus viviparus DICVIV_02775 I 0.869
EEL_0000428401 Elaeophora elaphi EEL_0000428401 N 0.854
crp Drosophila melanogaster FBgn0001994 D 0.879
GA20511 Drosophila pseudoobscura FBgn0080505 I 0.879
GF21721 Drosophila ananassae FBgn0098721 I 0.879
GG24179 Drosophila erecta FBgn0116312 I 0.879
GH10096 Drosophila grimshawi FBgn0117577 I 0.879
GI14377 Drosophila mojavensis FBgn0137129 I 0.879
GL14101 Drosophila persimilis FBgn0151706 I 0.879
GM17917 Drosophila sechellia FBgn0172824 I 0.879
GD21926 Drosophila simulans FBgn0193342 I 0.879
GJ16254 Drosophila virilis FBgn0203439 I 0.879
GK24289 Drosophila willistoni FBgn0226250 I 0.879
GE19372 Drosophila yakuba FBgn0236717 I 0.879
GB48999 Apis mellifera GB48999 I 0.860
GPUH_0001027101 Gongylonema pulchrum GPUH_0001027101 N 0.854
HCOI01121900 Haemonchus contortus HCOI01121900 I 0.869
HMEL008759 Heliconius melpomene HMEL008759 I 0.890
HPBE_0002474001 Heligmosomoides bakeri HPBE_0002474001 I 0.869
HPLM_0001857601 Haemonchus placei HPLM_0001857601 I 0.869
KGM_15765 Danaus plexippus KGM_15765 I 0.890
L798_07621 Zootermopsis nevadensis L798_07621 I 0.860
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I 0.860
LOAG_07256 Loa loa LOAG_07256 N 0.854
MDOA012071 Musca domestica MDOA012071 I 0.849
nAv.1.0.1.g08834 Acanthocheilonema viteae nAv.1.0.1.g08834 N 0.854
NBR_0000263101 Nippostrongylus brasiliensis NBR_0000263101 I 0.869
NBR_0000299801 Nippostrongylus brasiliensis NBR_0000299801 I 0.869
nDi.2.2.2.g07826 Dirofilaria immitis nDi.2.2.2.g07826 N 0.854
NECAME_04511 Necator americanus NECAME_04511 I 0.869
nLs.2.1.2.g06012 Litomosoides sigmodontis nLs.2.1.2.g06012 N 0.854
nOo.2.0.1.g02551 Onchocerca ochengi nOo.2.0.1.g02551 N 0.854
PPA14541 Pristionchus pacificus PPA14541 I 0.914
SVUK_0000451101 Strongylus vulgaris SVUK_0000451101 I 0.869
TCLT_0000678201 Thelazia callipaeda TCLT_0000678201 I 0.875
TELCIR_07248 Teladorsagia circumcincta TELCIR_07248 I 0.869
TELCIR_11314 Teladorsagia circumcincta TELCIR_11314 I 0.869
hlh-11 Caenorhabditis elegans WBGene00001955 D 0.890
WBGene00244598 Onchocerca volvulus WBGene00244598 N 0.854