CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0000846801
(
Angiostrongylus costaricensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
ACOC_0000846801
T053378_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hlh-11
M00931_2.00
Caenorhabditis elegans
ATCAGCTGA
TCAGCTGAT
PBM
Grove et al.(2009)
HLH11
0.869
0.865
crp
M03595_2.00
Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT
SELEX
Nitta et al.(2015)
crp_1
0.858
0.788
crp
M05937_2.00
Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB
B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994
0.858
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0000846801-mRNA-1
bHLH
35
86
RRQIANCNERRRMQSINAGFQSLRALLPRKEGEKLSKAAILQHTADLIQQLQ
Links
Other
bHLH
family TFs
Other
Angiostrongylus costaricensis
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001093601
Angiostrongylus cantonensis
ACAC_0001093601
I
0.914
ANCCAN_04319
Ancylostoma caninum
ANCCAN_04319
I
0.914
ANCCEY_00577
Ancylostoma ceylanicum
ANCCEY_00577
I
0.914
CGOC_0000858101
Cylicostephanus goldi
CGOC_0000858101
I
0.914
DICVIV_02775
Dictyocaulus viviparus
DICVIV_02775
I
0.914
HCOI01121900
Haemonchus contortus
HCOI01121900
I
0.914
HPBE_0002474001
Heligmosomoides bakeri
HPBE_0002474001
I
0.914
HPLM_0001857601
Haemonchus placei
HPLM_0001857601
I
0.914
NBR_0000263101
Nippostrongylus brasiliensis
NBR_0000263101
I
0.914
NBR_0000299801
Nippostrongylus brasiliensis
NBR_0000299801
I
0.914
NECAME_04511
Necator americanus
NECAME_04511
I
0.914
SVUK_0000451101
Strongylus vulgaris
SVUK_0000451101
I
0.914
TELCIR_07248
Teladorsagia circumcincta
TELCIR_07248
I
0.914
TELCIR_11314
Teladorsagia circumcincta
TELCIR_11314
I
0.914
BGIBMGA010353
Bombyx mori
BGIBMGA010353
I
0.869
CBG10034
Caenorhabditis briggsae
CBG10034
I
0.869
CBN22234
Caenorhabditis brenneri
CBN22234
I
0.869
CJA09019
Caenorhabditis japonica
CJA09019
I
0.869
CRE25281
Caenorhabditis remanei
CRE25281
I
0.869
HMEL008759
Heliconius melpomene
HMEL008759
I
0.869
KGM_15765
Danaus plexippus
KGM_15765
I
0.869
PPA14541
Pristionchus pacificus
PPA14541
I
0.869
hlh-11
Caenorhabditis elegans
WBGene00001955
D
0.869
scaffold60-EXSNAP2012.12
Pristionchus exspectatus
scaffold60-EXSNAP2012.12
I
0.869
ACYPI003006
Acyrthosiphon pisum
ACYPI003006
I
0.858
crp
Drosophila melanogaster
FBgn0001994
D
0.858
GA20511
Drosophila pseudoobscura
FBgn0080505
I
0.858
GF21721
Drosophila ananassae
FBgn0098721
I
0.858
GG24179
Drosophila erecta
FBgn0116312
I
0.858
GH10096
Drosophila grimshawi
FBgn0117577
I
0.858
GI14377
Drosophila mojavensis
FBgn0137129
I
0.858
GL14101
Drosophila persimilis
FBgn0151706
I
0.858
GM17917
Drosophila sechellia
FBgn0172824
I
0.858
GD21926
Drosophila simulans
FBgn0193342
I
0.858
GJ16254
Drosophila virilis
FBgn0203439
I
0.858
GK24289
Drosophila willistoni
FBgn0226250
I
0.858
GE19372
Drosophila yakuba
FBgn0236717
I
0.858
Bm4538
Brugia malayi
Bm4538
N
0.851
LOAG_07256
Loa loa
LOAG_07256
N
0.851
WBGene00244598
Onchocerca volvulus
WBGene00244598
N
0.851
BTMF_0001307601
Brugia timori
BTMF_0001307601
N
0.851
EEL_0000428401
Elaeophora elaphi
EEL_0000428401
N
0.851
GPUH_0001027101
Gongylonema pulchrum
GPUH_0001027101
N
0.851
nAv.1.0.1.g08834
Acanthocheilonema viteae
nAv.1.0.1.g08834
N
0.851
nDi.2.2.2.g07826
Dirofilaria immitis
nDi.2.2.2.g07826
N
0.851
nLs.2.1.2.g06012
Litomosoides sigmodontis
nLs.2.1.2.g06012
N
0.851
nOo.2.0.1.g02551
Onchocerca ochengi
nOo.2.0.1.g02551
N
0.851
ASIM_0001377801
Anisakis simplex
ASIM_0001377801
N
0.843
ASU_09033
Ascaris suum
ASU_09033
N
0.843
TCNE_0001886101
Toxocara canis
TCNE_0001886101
N
0.843
AGAP010201
Anopheles gambiae
AGAP010201
I
0.839
GB48999
Apis mellifera
GB48999
I
0.839
L798_07621
Zootermopsis nevadensis
L798_07621
I
0.839
LLOJ009485
Lutzomyia longipalpis
LLOJ009485
I
0.839
ANCDUO_12144
Ancylostoma duodenale
ANCDUO_12144
N
0.675