CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000481301
(
Trichuris trichiura
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
TTRE_0000481301
T055958_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000481301
Brinker
3
54
SLTRSYKAGFKLEVVKMAKETNNAQAARKYGVTPKMVIDWKNQGEALKKMPK
Links
Other
Brinker
family TFs
Other
Trichuris trichiura
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA019849
Oryza indica
BGIOSGA019849
N
BRADI2G25830
Brachypodium distachyon
BRADI2G25830
N
GRMZM2G029933
Zea mays
GRMZM2G029933
N
LPERR05G12600
Leersia perrieri
LPERR05G12600
N
OB05G23840
Oryza brachyantha
OB05G23840
N
OBART05G15900
Oryza barthii
OBART05G15900
N
OGLUM05G16820
Oryza glumaepatula
OGLUM05G16820
N
OLONG_006623
Oryza longistaminata
OLONG_006623
N
ONIVA05G16510
Oryza nivara
ONIVA05G16510
N
OPUNC05G14080
Oryza punctata
OPUNC05G14080
N
ORGLA05G0138100
Oryza glaberrima
ORGLA05G0138100
N
ORUFI05G17050
Oryza rufipogon
ORUFI05G17050
N
OS05G0404000
Oryza sativa
OS05G0404000
N
Pavir.J03675
Panicum virgatum
Pavir.J03675
N
Pavir.J39419
Panicum virgatum
Pavir.J39419
N
Sb09g019800
Sorghum bicolor
Sb09g019800
N
Si021844m.g
Setaria italica
Si021844m.g
N
TRIUR3_11739
Triticum urartu
TRIUR3_11739
N