CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB05G23840
(
Oryza brachyantha
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
OB05G23840
T263023_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB05G23840.1
mTERF
15
73
FLASLGVDPGELAGLELPATVDVMRERVEFLHSLGLSNEDLSAYPLALGCSVRKNMVPV
OB05G23840.1
mTERF
74
382
LDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPIDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQIGSVITRFPEVLGMRVGKIIKPFTEHLEGIGLQRLAIARIIEKKPYVLGFGLDDKVKPNIEALLEFGVRKEALASVVAQYPDILGIELRDKLVAQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTACGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERNSEELVEFPAFFTYGLESTIRPRHEIVAKKGFTCSLAWLLNCSDEKFD
Links
Other
mTERF
family TFs
Other
Oryza brachyantha
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI05G13880
Oryza meridionalis
OMERI05G13880
N
0.972
BRADI2G25830
Brachypodium distachyon
BRADI2G25830
N
0.894
OBART05G15900
Oryza barthii
OBART05G15900
N
0.867
BGIOSGA019849
Oryza indica
BGIOSGA019849
N
0.864
OLONG_006623
Oryza longistaminata
OLONG_006623
N
0.864
ORUFI05G17050
Oryza rufipogon
ORUFI05G17050
N
0.864
OS05G0404000
Oryza sativa
OS05G0404000
N
0.864
OGLUM05G16820
Oryza glumaepatula
OGLUM05G16820
N
0.854
ONIVA05G16510
Oryza nivara
ONIVA05G16510
N
0.854
ORUFI09G19270
Oryza rufipogon
ORUFI09G19270
N
0.851
Sb09g019800
Sorghum bicolor
Sb09g019800
N
0.817
GRMZM2G029933
Zea mays
GRMZM2G029933
N
0.811
TRIUR3_11739
Triticum urartu
TRIUR3_11739
N
0.802
ORGLA05G0138100
Oryza glaberrima
ORGLA05G0138100
N
0.801
OPUNC05G14080
Oryza punctata
OPUNC05G14080
N
0.795
LPERR05G12600
Leersia perrieri
LPERR05G12600
N
0.792
MLOC_21457
Hordeum vulgare
MLOC_21457
N
0.769
Si021844m.g
Setaria italica
Si021844m.g
N
0.762
Pavir.J03675
Panicum virgatum
Pavir.J03675
N
0.741
Pavir.J39419
Panicum virgatum
Pavir.J39419
N
0.708
gene27730-v1.0-hybrid
Fragaria vesca
gene27730-v1.0-hybrid
N
0.704
GSMUA_Achr3G24870_001
Musa acuminata
GSMUA_Achr3G24870_001
N
0.701