GBF2 (Arabidopsis lyrata)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Al_scaffold_0006_3899 T056731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.872 0.969
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.852 0.672
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.851 0.656
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.848 0.656
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.835 0.688
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.835 0.688
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.830 0.719
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.830 0.719
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.830 0.719
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.808 0.609
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.808 0.609
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.808 0.609
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.808 0.609
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.808 0.609
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.787 0.531
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.787 0.531
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.786 0.547
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.786 0.547
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.786 0.578
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.784 0.594
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.784 0.594
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.784 0.594
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.783 0.625
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.783 0.625
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.783 0.625
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.783 0.500
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.783 0.500
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0006_3899 bZIP 260 323

Links

Other bZIP family TFs
Other Arabidopsis lyrata TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP25962 Atta cephalotes ACEP25962 N
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N
CapteG131555 Capitella teleta CapteG131555 I
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N
CLEC001081 Cimex lectularius CLEC001081 N
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N
ARID2 Bos taurus ENSBTAG00000011087 N
ARID2 Canis familiaris ENSCAFG00000009335 N
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N
ARID2 Equus caballus ENSECAG00000019032 N
ARID2 Felis catus ENSFCAG00000012831 N
ARID2 Homo sapiens ENSG00000189079 N
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N
ARID2 Loxodonta africana ENSLAFG00000004415 N
ARID2 Microcebus murinus ENSMICG00000001487 N
ARID2 Myotis lucifugus ENSMLUG00000006908 N
ARID2 Macaca mulatta ENSMMUG00000015962 N
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N
ARID2 Monodelphis domestica ENSMODG00000018527 N
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N
ARID2 Otolemur garnettii ENSOGAG00000024418 N
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N
ARID2 Pteropus vampyrus ENSPVAG00000009834 N
ARID2 Sorex araneus ENSSARG00000007415 N
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N
ARID2 Vicugna pacos ENSVPAG00000004779 N
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N
e_gw.237.152.1 Branchiostoma floridae e_gw.237.152.1 I
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I
HelroG195033 Helobdella robusta HelroG195033 N
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N
ISCW014107 Ixodes scapularis ISCW014107 N
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N
NV23037 Nasonia vitripennis NV23037 I
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N
Tal_R007164 Tyto alba Tal_R007164 N