CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BACH1
(
Pan troglodytes
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSPTRG00000013824
T061220_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BACH1
M08184_2.00
Homo sapiens
RTCACGTG
CACGTGAY
ChIP-seq
Contrino et al.(2012)
Mv45
0.931
1.000
BACH1
M08185_2.00
Homo sapiens
TGASTCAGCA
TGCTGASTCA
ChIP-seq
Contrino et al.(2012)
Mv46
0.931
1.000
BACH1
M08186_2.00
Homo sapiens
TCAGCADTT
AAHTGCTGA
ChIP-seq
Contrino et al.(2012)
Mv47
0.931
1.000
BACH1
M08800_2.00
Homo sapiens
VNVTGACTCAGCA
TGCTGAGTCABNB
Misc
Kulakovskiy et al.(2013)
BACH1_HUMAN.H11MO.0.A
0.931
1.000
Bach1
M08823_2.00
Mus musculus
ASCRTGACTCAGCR
YGCTGAGTCAYGST
Misc
Kulakovskiy et al.(2013)
BACH1_MOUSE.H11MO.0.C
0.931
1.000
BACH1
M09488_2.00
Homo sapiens
RTGACTCAGCANWWH
DWWNTGCTGAGTCAY
Misc
Heinz et al.(2010)
K562-Bach1_GSE31477
0.931
1.000
BACH1
M09975_2.00
Homo sapiens
VNBATGACTCATSNB
VNSATGAGTCATVNB
Transfac
Matys et al.(2006)
V$BACH1_01
0.931
1.000
BACH1
M09976_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BACH1_Q3
0.931
1.000
Bach2
M08832_2.00
Mus musculus
RTGACTCAGCN
NGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
BACH2_MOUSE.H11MO.0.A
0.838
0.721
BACH2
M04247_2.00
Homo sapiens
NWWNCATGASTCATSNHWN
NWDNSATGASTCATGNWWN
SELEX
Yin et al.(2017)
BACH2_eDBD_HT-SELEX_1
0.838
0.689
BACH2
M04248_2.00
Homo sapiens
DWANSATGACGTSATSNTWD
HWANSATSACGTCATSNTWH
SELEX
Yin et al.(2017)
BACH2_eDBD_HT-SELEX_2
0.838
0.689
BACH2
M08065_2.00
Homo sapiens
NVTGACTCAGCANN
NNTGCTGAGTCABN
ChIP-seq
Mathelier et al.(2014)
MA1101.1
0.838
0.689
BACH2
M08787_2.00
Homo sapiens
VTGASTCAGCA
TGCTGASTCAB
Misc
Kulakovskiy et al.(2013)
BACH2_HUMAN.H11MO.0.A
0.838
0.689
BACH2
M09484_2.00
Homo sapiens
TGASTCAGCN
NGCTGASTCA
Misc
Heinz et al.(2010)
OCILy7-Bach2_GSE44420
0.838
0.689
BACH2
M09938_2.00
Homo sapiens
BVTGACKCAYS
SRTGMGTCABV
Transfac
Matys et al.(2006)
V$BACH2_01
0.838
0.689
BACH2
M04249_2.00
Homo sapiens
NWANCATGASTCATSNWWN
NWWNSATGASTCATGNTWN
SELEX
Yin et al.(2017)
BACH2_eDBD_Methyl-HT-SELEX
0.838
0.689
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000023815
bZIP
558
618
IHDIRRRSKNRIAAQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHILSTLGETKQNLT
Links
Other
bZIP
family TFs
Other
Pan troglodytes
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29929.m004641
Ricinus communis
29929.m004641
I
SPL3
Oryza indica
BGIOSGA007499
N
BRADI3G05510
Brachypodium distachyon
BRADI3G05510
I
evm.TU.supercontig_43.66
Carica papaya
evm.TU.supercontig_43.66
I
GRMZM2G065451
Zea mays
GRMZM2G065451
N
GRMZM2G097275
Zea mays
GRMZM2G097275
N
GRMZM2G126827
Zea mays
GRMZM2G126827
N
GRMZM2G156621
Zea mays
GRMZM2G156621
N
GRMZM2G163813
Zea mays
GRMZM2G163813
N
GSMUA_Achr10G02970_001
Musa acuminata
GSMUA_Achr10G02970_001
N
GSMUA_Achr3G05360_001
Musa acuminata
GSMUA_Achr3G05360_001
N
GSMUA_Achr4G12470_001
Musa acuminata
GSMUA_Achr4G12470_001
I
GSMUA_Achr5G22630_001
Musa acuminata
GSMUA_Achr5G22630_001
N
GSMUA_Achr9G23140_001
Musa acuminata
GSMUA_Achr9G23140_001
I
LPERR02G02980
Leersia perrieri
LPERR02G02980
N
LPERR06G19770
Leersia perrieri
LPERR06G19770
N
mgf010397m
Mimulus guttatus
mgf010397m
N
mgf019346m
Mimulus guttatus
mgf019346m
I
MLOC_62426
Hordeum vulgare
MLOC_62426
N
OB02G12930
Oryza brachyantha
OB02G12930
N
OB06G31550
Oryza brachyantha
OB06G31550
N
OBART02G03260
Oryza barthii
OBART02G03260
N
OBART06G23820
Oryza barthii
OBART06G23820
N
OGLUM06G25070
Oryza glumaepatula
OGLUM06G25070
N
OLONG_025693
Oryza longistaminata
OLONG_025693
N
OMERI02G03900
Oryza meridionalis
OMERI02G03900
N
OMERI06G23750
Oryza meridionalis
OMERI06G23750
N
ONIVA02G03070
Oryza nivara
ONIVA02G03070
N
ONIVA06G27990
Oryza nivara
ONIVA06G27990
N
OPUNC02G02570
Oryza punctata
OPUNC02G02570
N
ORGLA02G0030600
Oryza glaberrima
ORGLA02G0030600
N
ORGLA06G0199900
Oryza glaberrima
ORGLA06G0199900
N
ORUFI02G03180
Oryza rufipogon
ORUFI02G03180
N
ORUFI06G25590
Oryza rufipogon
ORUFI06G25590
N
OS02G0139400
Oryza sativa
OS02G0139400
N
SPL11
Oryza sativa
OS06G0663500
N
Pavir.Ab00499
Panicum virgatum
Pavir.Ab00499
N
Pavir.J20730
Panicum virgatum
Pavir.J20730
N
PGSC0003DMG400026736
Solanum tuberosum
PGSC0003DMG400026736
I
POPTR_0001s13890
Populus trichocarpa
POPTR_0001s13890
I
POPTR_0003s17120
Populus trichocarpa
POPTR_0003s17120
I
SapurV1A.0056s0240
Salix purpurea
SapurV1A.0056s0240
I
SapurV1A.1271s0060
Salix purpurea
SapurV1A.1271s0060
I
Sb04g003175
Sorghum bicolor
Sb04g003175
N
Sb04g004940
Sorghum bicolor
Sb04g004940
N
Si017749m.g
Setaria italica
Si017749m.g
N
Traes_6AS_32A35158A
Triticum aestivum
Traes_6AS_32A35158A
N
Traes_6DS_C4D93239C
Triticum aestivum
Traes_6DS_C4D93239C
N
VIT_01s0010g03710
Vitis vinifera
VIT_01s0010g03710
I