BRADI3G05510 (Brachypodium distachyon)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 BRADI3G05510 T322493_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.900 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G05510.1 SBP 61 135

Links

Other SBP family TFs
Other Brachypodium distachyon TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.978
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.978
Si017749m.g Setaria italica Si017749m.g N 0.978
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.978
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.978
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.978
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.978
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.978
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.976
mgf010397m Mimulus guttatus mgf010397m N 0.974
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.971
29929.m004641 Ricinus communis 29929.m004641 I 0.970
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.970
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.967
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.966
mgf019346m Mimulus guttatus mgf019346m I 0.965
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.965
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.964
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.961
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.960
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.960
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.960
Ca_11356 Cicer arietinum Ca_11356 I 0.960
TCM_008772 Theobroma cacao TCM_008772 N 0.959
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.958
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.958
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.958
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.958
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.958
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.958
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.958
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.953
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.953
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.953
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.953
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.953
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.953
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.953
SPL4 Oryza sativa OS02G0174100 N 0.953
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.953
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.953
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.950
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.950
Pm007020 Prunus mume Pm007020 N 0.947
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.946
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.946
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.945
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.945
OB02G14840 Oryza brachyantha OB02G14840 N 0.945
PK16953.1 Cannabis sativa PK16953.1 N 0.945
SPL2 Arabidopsis thaliana AT5G43270 N 0.944
Bo9g058970 Brassica oleracea Bo9g058970 N 0.944
Bra027478 Brassica rapa Bra027478 N 0.944
Bra033671 Brassica rapa Bra033671 N 0.944
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.944
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.944
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.944
SPL12 Oryza indica BGIOSGA020577 N 0.943
OBART06G26610 Oryza barthii OBART06G26610 N 0.943
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.943
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.943
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.943
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.943
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.943
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.943
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.943
SPL12 Oryza sativa OS06G0703500 N 0.943
MDP0000155354 Malus domestica MDP0000155354 N 0.943
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.943
Bo7g065290 Brassica oleracea Bo7g065290 N 0.942
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.942
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.941
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.941
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.939
OB06G34330 Oryza brachyantha OB06G34330 N 0.936
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.933
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.932
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.932
Si017520m.g Setaria italica Si017520m.g N 0.932
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.931
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.930
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.930
F775_31908 Aegilops tauschii F775_31908 N 0.929
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.929
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.929
OB02G12930 Oryza brachyantha OB02G12930 N 0.929
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.929
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.928
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.927
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.926
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.926
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.925
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.924
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.924
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.924
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.921
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.921
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.920
SPL3 Oryza indica BGIOSGA007499 N 0.918
OBART02G03260 Oryza barthii OBART02G03260 N 0.918
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.918
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.918
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.918
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.918
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.918
OS02G0139400 Oryza sativa OS02G0139400 N 0.918
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.916
Solyc04g045560.2 Solanum lycopersicum Solyc04g045560.2 N 0.916
BGIOSGA020731 Oryza indica BGIOSGA020731 N 0.914
OB06G31550 Oryza brachyantha OB06G31550 N 0.914
OBART06G23820 Oryza barthii OBART06G23820 N 0.914
OGLUM06G25070 Oryza glumaepatula OGLUM06G25070 N 0.914
OMERI06G23750 Oryza meridionalis OMERI06G23750 N 0.914
ONIVA06G27990 Oryza nivara ONIVA06G27990 N 0.914
ORGLA06G0199900 Oryza glaberrima ORGLA06G0199900 N 0.914
ORUFI06G25590 Oryza rufipogon ORUFI06G25590 N 0.914
SPL11 Oryza sativa OS06G0663500 N 0.914
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.912
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.908
SPL10 Arabidopsis thaliana AT1G27370 D 0.900
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.895
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.895
Bra030041 Brassica rapa Bra030041 I 0.894
Bo7g049940 Brassica oleracea Bo7g049940 I 0.891
Bo5g051970 Brassica oleracea Bo5g051970 I 0.890
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.890
Sb10g029190 Sorghum bicolor Sb10g029190 N 0.890
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.890
Bra032823 Brassica rapa Bra032823 I 0.889
SPL10 Arabidopsis lyrata fgenesh2_kg.1__2893__AT1G27370.2 I 0.888
Bostr.15697s0063 Boechera stricta Bostr.15697s0063 I 0.888
Thhalv10007832m.g Eutrema salsugineum Thhalv10007832m.g I 0.888