PGSC0003DMG400034310 (Solanum tuberosum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 PGSC0003DMG400034310 T322937_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400084733 SBP 176 250
PGSC0003DMT400084734 SBP 176 250

Links

Other SBP family TFs
Other Solanum tuberosum TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.973
TCM_008772 Theobroma cacao TCM_008772 N 0.968
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.963
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.962
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.962
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.961
PK16953.1 Cannabis sativa PK16953.1 N 0.958
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.957
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.955
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.955
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.955
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.955
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.954
Pm007020 Prunus mume Pm007020 N 0.953
MDP0000155354 Malus domestica MDP0000155354 N 0.953
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.952
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.951
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.951
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.951
Ca_11356 Cicer arietinum Ca_11356 I 0.951
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.951
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.951
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.949
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.948
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.948
29929.m004641 Ricinus communis 29929.m004641 I 0.943
Bo7g065290 Brassica oleracea Bo7g065290 N 0.939
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.938
SPL2 Arabidopsis thaliana AT5G43270 N 0.937
Bo9g058970 Brassica oleracea Bo9g058970 N 0.937
Bra027478 Brassica rapa Bra027478 N 0.937
Bra033671 Brassica rapa Bra033671 N 0.937
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.937
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.937
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.937
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.936
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.936
mgf010397m Mimulus guttatus mgf010397m N 0.934
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.934
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.934
mgf019346m Mimulus guttatus mgf019346m I 0.933
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.932
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.932
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.932
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.930
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.930
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.930
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.929
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.928
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.928
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.926
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.926
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.924
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.918
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.911
Si017749m.g Setaria italica Si017749m.g N 0.907
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.905
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.905
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.904
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.900
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.900
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.898
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.897
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.897
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.897
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.897
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.895
SPL3 Oryza indica BGIOSGA007499 N 0.894
OB02G12930 Oryza brachyantha OB02G12930 N 0.894
OBART02G03260 Oryza barthii OBART02G03260 N 0.894
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.894
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.894
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.894
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.894
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.894
OS02G0139400 Oryza sativa OS02G0139400 N 0.894
SPL12 Oryza indica BGIOSGA020577 N 0.893
OBART06G26610 Oryza barthii OBART06G26610 N 0.893
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.893
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.893
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.893
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.893
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.893
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.893
SPL12 Oryza sativa OS06G0703500 N 0.893
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.892
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.891
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.890
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.890