Lus10021614.g (Linum usitatissimum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Lus10021614.g T323541_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10021614 SBP 165 239

Links

Other SBP family TFs
Other Linum usitatissimum TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.977
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.976
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.976
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.973
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.971
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.964
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.960
TCM_008772 Theobroma cacao TCM_008772 N 0.957
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.955
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.955
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.952
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.950
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.949
PK16953.1 Cannabis sativa PK16953.1 N 0.944
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.943
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.943
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.942
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.942
MDP0000155354 Malus domestica MDP0000155354 N 0.942
Pm007020 Prunus mume Pm007020 N 0.941
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.940
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.940
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.940
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.940
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.940
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.938
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.936
Ca_11356 Cicer arietinum Ca_11356 I 0.936
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.936
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.935
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.935
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.926
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.925
29929.m004641 Ricinus communis 29929.m004641 I 0.924
SPL2 Arabidopsis thaliana AT5G43270 N 0.923
Bo9g058970 Brassica oleracea Bo9g058970 N 0.923
Bra027478 Brassica rapa Bra027478 N 0.923
Bra033671 Brassica rapa Bra033671 N 0.923
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.923
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.923
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.922
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.920
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.920
Bo7g065290 Brassica oleracea Bo7g065290 N 0.919
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.919
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.919
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.919
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.919
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.919
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.917
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.915
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.914
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.912
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.910
mgf010397m Mimulus guttatus mgf010397m N 0.907
Bra038324 Brassica rapa Bra038324 I 0.905
Bo2g062840 Brassica oleracea Bo2g062840 I 0.903
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.902
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N 0.901
mgf019346m Mimulus guttatus mgf019346m I 0.899
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.898
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.898
Si017749m.g Setaria italica Si017749m.g N 0.894
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.893
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.892
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.890
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.888
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.888
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.888
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.887