Gorai.002G182700 (Gossypium raimondii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Gorai.002G182700 T323498_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G182700.1 SBP 188 262
Gorai.002G182700.2 SBP 188 262
Gorai.002G182700.3 SBP 188 262
Gorai.002G182700.4 SBP 188 262
Gorai.002G182700.5 SBP 188 262
Gorai.002G182700.6 SBP 188 262
Gorai.002G182700.7 SBP 188 262
Gorai.002G182700.8 SBP 188 262
Gorai.002G182700.9 SBP 188 262

Links

Other SBP family TFs
Other Gossypium raimondii TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_008772 Theobroma cacao TCM_008772 N 0.979
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.975
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.975
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.974
PK16953.1 Cannabis sativa PK16953.1 N 0.972
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.971
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.970
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.970
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.970
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.970
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.970
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.970
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.969
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.969
Pm007020 Prunus mume Pm007020 N 0.969
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.968
MDP0000155354 Malus domestica MDP0000155354 N 0.968
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.967
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.967
Ca_11356 Cicer arietinum Ca_11356 I 0.966
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.964
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.963
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.962
29929.m004641 Ricinus communis 29929.m004641 I 0.962
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.961
Bo7g065290 Brassica oleracea Bo7g065290 N 0.959
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.959
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.958
SPL2 Arabidopsis thaliana AT5G43270 N 0.957
Bo9g058970 Brassica oleracea Bo9g058970 N 0.957
Bra027478 Brassica rapa Bra027478 N 0.957
Bra033671 Brassica rapa Bra033671 N 0.957
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.957
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.957
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.957
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.957
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.957
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.955
mgf010397m Mimulus guttatus mgf010397m N 0.955
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.954
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.954
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.953
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.953
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.953
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.953
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.953
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.952
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.951
mgf019346m Mimulus guttatus mgf019346m I 0.951
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.950
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.949
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.949
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.945
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.945
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.938
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.935
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.935
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.934
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.933
Si017749m.g Setaria italica Si017749m.g N 0.933
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.932
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.930
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.930
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.930
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.930
SPL3 Oryza indica BGIOSGA007499 N 0.928
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.928
OB02G12930 Oryza brachyantha OB02G12930 N 0.928
OBART02G03260 Oryza barthii OBART02G03260 N 0.928
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.928
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.928
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.928
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.928
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.928
OS02G0139400 Oryza sativa OS02G0139400 N 0.928
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.928
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.928
SPL12 Oryza indica BGIOSGA020577 N 0.925
OBART06G26610 Oryza barthii OBART06G26610 N 0.925
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.925
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.925
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.925
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.925
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.925
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.925
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.925
SPL12 Oryza sativa OS06G0703500 N 0.925
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.924
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.924
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.923
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.923
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.920
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.920
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.920
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.920
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.920
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.920
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.920
SPL4 Oryza sativa OS02G0174100 N 0.920
OB02G14840 Oryza brachyantha OB02G14840 N 0.919
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.917
F775_31908 Aegilops tauschii F775_31908 N 0.916
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.916
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.914
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.914
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.914
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.914
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.913
OB06G34330 Oryza brachyantha OB06G34330 N 0.908
Si017520m.g Setaria italica Si017520m.g N 0.906
Ca_08506 Cicer arietinum Ca_08506 I 0.904
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.904
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.904
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.901
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.895
PDK_20s1305791g002 Phoenix dactylifera PDK_20s1305791g002 N 0.893
Gorai.012G176500 Gossypium raimondii Gorai.012G176500 N 0.887