Si017520m.g (Setaria italica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Si017520m.g T323048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si017520m SBP 189 263
Si017593m SBP 172 246
Si017598m SBP 172 246

Links

Other SBP family TFs
Other Setaria italica TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.981
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.981
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.975
SPL12 Oryza indica BGIOSGA020577 N 0.974
OBART06G26610 Oryza barthii OBART06G26610 N 0.974
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.974
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.974
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.974
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.974
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.974
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.974
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.974
SPL12 Oryza sativa OS06G0703500 N 0.974
OB06G34330 Oryza brachyantha OB06G34330 N 0.971
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.964
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.957
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.955
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.955
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.955
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.955
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.955
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.955
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.955
F775_31908 Aegilops tauschii F775_31908 N 0.954
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.954
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.954
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.953
Si017749m.g Setaria italica Si017749m.g N 0.953
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.952
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.951
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.951
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.951
Sb10g029190 Sorghum bicolor Sb10g029190 N 0.950
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.949
OB02G12930 Oryza brachyantha OB02G12930 N 0.948
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.948
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.948
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.946
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.946
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.946
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.946
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.946
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.946
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.946
SPL4 Oryza sativa OS02G0174100 N 0.946
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.945
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.945
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.945
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.944
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.943
OB02G14840 Oryza brachyantha OB02G14840 N 0.939
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.932
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.932
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.930
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.928
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.927
GRMZM2G414805 Zea mays GRMZM2G414805 N 0.925
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.925
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.925
SPL3 Oryza indica BGIOSGA007499 N 0.924
OBART02G03260 Oryza barthii OBART02G03260 N 0.924
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.924
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.924
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.924
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.924
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.924
OS02G0139400 Oryza sativa OS02G0139400 N 0.924
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.922
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.921
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.919
TCM_008772 Theobroma cacao TCM_008772 N 0.917
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.917
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.916
Si006472m.g Setaria italica Si006472m.g N 0.913
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.912
Ca_11356 Cicer arietinum Ca_11356 I 0.910
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.908
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.908
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.908
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.908
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.907
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.906
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.905
mgf010397m Mimulus guttatus mgf010397m N 0.896
Pm007020 Prunus mume Pm007020 N 0.894
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.892
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.892
PK16953.1 Cannabis sativa PK16953.1 N 0.891
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.889
MDP0000155354 Malus domestica MDP0000155354 N 0.888
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.887