MTR_3g085180 (Medicago truncatula)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 MTR_3g085180 T322735_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AES72018 SBP 165 239

Links

Other SBP family TFs
Other Medicago truncatula TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.984
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.978
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.973
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.972
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.969
TCM_008772 Theobroma cacao TCM_008772 N 0.969
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.964
Ca_11356 Cicer arietinum Ca_11356 I 0.963
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.963
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.962
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.961
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.960
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.960
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.959
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.958
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.958
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.958
Pm007020 Prunus mume Pm007020 N 0.958
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.958
PK16953.1 Cannabis sativa PK16953.1 N 0.958
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.957
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.957
MDP0000155354 Malus domestica MDP0000155354 N 0.957
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.956
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.955
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.955
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.955
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.955
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.955
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.953
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.950
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.950
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.950
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.950
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.948
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.947
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.945
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.944
29929.m004641 Ricinus communis 29929.m004641 I 0.943
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.943
SPL2 Arabidopsis thaliana AT5G43270 N 0.942
Bo9g058970 Brassica oleracea Bo9g058970 N 0.942
Bra027478 Brassica rapa Bra027478 N 0.942
Bra033671 Brassica rapa Bra033671 N 0.942
GSMUA_Achr6G36010_001 Musa acuminata GSMUA_Achr6G36010_001 N 0.942
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.942
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.942
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.941
Bo7g065290 Brassica oleracea Bo7g065290 N 0.940
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.940
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.940
Lus10006411.g Linum usitatissimum Lus10006411.g I 0.938
Eucgr.B03500 Eucalyptus grandis Eucgr.B03500 I 0.937
Pavir.Ab00499 Panicum virgatum Pavir.Ab00499 N 0.936
Pavir.J20730 Panicum virgatum Pavir.J20730 N 0.936
mgf010397m Mimulus guttatus mgf010397m N 0.935
mgf019346m Mimulus guttatus mgf019346m I 0.935
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.934
Si017749m.g Setaria italica Si017749m.g N 0.934
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.927
Traes_6AS_32A35158A Triticum aestivum Traes_6AS_32A35158A N 0.926
Traes_6DS_C4D93239C Triticum aestivum Traes_6DS_C4D93239C N 0.926
Gorai.005G166500 Gossypium raimondii Gorai.005G166500 N 0.919
BGIOSGA007643 Oryza indica BGIOSGA007643 N 0.918
LPERR02G04880 Leersia perrieri LPERR02G04880 N 0.918
OGLUM02G05530 Oryza glumaepatula OGLUM02G05530 N 0.918
OMERI02G06420 Oryza meridionalis OMERI02G06420 N 0.918
OPUNC02G04800 Oryza punctata OPUNC02G04800 N 0.918
ORGLA02G0051400 Oryza glaberrima ORGLA02G0051400 N 0.918
ORUFI02G05750 Oryza rufipogon ORUFI02G05750 N 0.918
SPL4 Oryza sativa OS02G0174100 N 0.918
GSMUA_Achr4G05720_001 Musa acuminata GSMUA_Achr4G05720_001 N 0.917
GSMUA_Achr4G12470_001 Musa acuminata GSMUA_Achr4G12470_001 I 0.915
OB02G14840 Oryza brachyantha OB02G14840 N 0.915
GSMUA_Achr9G23140_001 Musa acuminata GSMUA_Achr9G23140_001 I 0.913
Lus10011356.g Linum usitatissimum Lus10011356.g I 0.912
GRMZM2G065451 Zea mays GRMZM2G065451 N 0.911
GRMZM2G097275 Zea mays GRMZM2G097275 N 0.911
OB02G12930 Oryza brachyantha OB02G12930 N 0.911
LPERR06G22200 Leersia perrieri LPERR06G22200 N 0.910
LPERR02G02980 Leersia perrieri LPERR02G02980 N 0.908
OPUNC02G02570 Oryza punctata OPUNC02G02570 N 0.908
SPL12 Oryza indica BGIOSGA020577 N 0.907
MTR_8g080680 Medicago truncatula MTR_8g080680 N 0.907
OBART06G26610 Oryza barthii OBART06G26610 N 0.907
OGLUM06G28030 Oryza glumaepatula OGLUM06G28030 N 0.907
OLONG_012160 Oryza longistaminata OLONG_012160 N 0.907
OMERI06G26720 Oryza meridionalis OMERI06G26720 N 0.907
ONIVA06G29160 Oryza nivara ONIVA06G29160 N 0.907
ORGLA06G0222300 Oryza glaberrima ORGLA06G0222300 N 0.907
ORUFI06G28570 Oryza rufipogon ORUFI06G28570 N 0.907
SPL12 Oryza sativa OS06G0703500 N 0.907
OPUNC06G24320 Oryza punctata OPUNC06G24320 N 0.905
SPL3 Oryza indica BGIOSGA007499 N 0.904
BRADI3G03510 Brachypodium distachyon BRADI3G03510 N 0.904
OBART02G03260 Oryza barthii OBART02G03260 N 0.904
OLONG_025693 Oryza longistaminata OLONG_025693 N 0.904
OMERI02G03900 Oryza meridionalis OMERI02G03900 N 0.904
ONIVA02G03070 Oryza nivara ONIVA02G03070 N 0.904
ORGLA02G0030600 Oryza glaberrima ORGLA02G0030600 N 0.904
ORUFI02G03180 Oryza rufipogon ORUFI02G03180 N 0.904
OS02G0139400 Oryza sativa OS02G0139400 N 0.904
F775_31908 Aegilops tauschii F775_31908 N 0.903
Traes_6DS_7B1596298 Triticum aestivum Traes_6DS_7B1596298 N 0.903
MLOC_11199 Hordeum vulgare MLOC_11199 N 0.900
Traes_6AS_99C6A3B0B Triticum aestivum Traes_6AS_99C6A3B0B N 0.900
Traes_6BS_F50663DF7 Triticum aestivum Traes_6BS_F50663DF7 N 0.900
TRIUR3_09477 Triticum urartu TRIUR3_09477 N 0.900
GSMUA_Achr3G27750_001 Musa acuminata GSMUA_Achr3G27750_001 N 0.898
OB06G34330 Oryza brachyantha OB06G34330 N 0.895
ONIVA02G05960 Oryza nivara ONIVA02G05960 N 0.893
Si017520m.g Setaria italica Si017520m.g N 0.892
SapurV1A.0001s2320 Salix purpurea SapurV1A.0001s2320 N 0.891
Pavir.Aa03225 Panicum virgatum Pavir.Aa03225 N 0.889
Pavir.Ab00358 Panicum virgatum Pavir.Ab00358 N 0.889
Sb04g003175 Sorghum bicolor Sb04g003175 N 0.886