CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000013989
(
Sarcophilus harrisii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSSHAG00000013989
T061392_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Cebpe
M01815_2.00
Mus musculus
TKDYGCAA
TTGCRHMA
PBM
Weirauch et al.(2014)
pTH5253
0.900
0.968
Cebpe
M08836_2.00
Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A
0.900
0.968
CEBPE
M02824_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPE_1
0.898
0.968
CEBPE
M02729_2.00
Homo sapiens
VTTDYRHAAY
RTTDYRHAAB
SELEX
Jolma et al.(2010)
CEBPE_dimer
0.898
0.968
CEBPE
M04227_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX
0.898
0.968
CEBPE
M04009_2.00
Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1
0.898
0.968
CEBPE
M08783_2.00
Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB
Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A
0.898
0.968
CEBPE
M09927_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_01
0.898
0.968
CEBPE
M09928_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6_01
0.898
0.968
CEBPE
M09929_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPE_Q6
0.898
0.968
CEBPE
M04228_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX
0.898
0.968
CEBPB
M02851_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_1
0.822
0.714
CEBPB
M02852_2.00
Homo sapiens
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
CEBPB_2
0.822
0.714
CEBPB
M04331_2.00
Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN
SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX
0.822
0.714
CEBPB
M05840_2.00
Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY
SMiLE-seq
Isakova et al.(2017)
CEBPb
0.822
0.714
CEBPB
M07830_2.00
Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford
0.822
0.714
CEBPB
M07831_2.00
Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY
ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford
0.822
0.714
CEBPB
M07832_2.00
Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH
ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford
0.822
0.714
CEBPB
M08804_2.00
Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A
0.822
0.714
CEBPB
M09993_2.00
Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY
Transfac
Matys et al.(2006)
V$CEBPB_01
0.822
0.714
CEBPB
M09994_2.00
Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN
Transfac
Matys et al.(2006)
V$CEBPB_02
0.822
0.714
CEBPB
M09995_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_04
0.822
0.714
CEBPB
M09996_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_07
0.822
0.714
CEBPB
M09997_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q3
0.822
0.714
CEBPB
M09998_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPB_Q6
0.822
0.714
CEBPB
M04332_2.00
Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN
SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX
0.822
0.714
Cebpb
M02636_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Tillo et al.(2017)
CEBPB_C
0.814
0.698
Cebpb
M00999_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Mann et al.(2013)
CEBPB_UM_HK
0.814
0.698
Cebpb
M00761_2.00
Mus musculus
NTKDHGHAAB
VTTDCDHMAN
PBM
Weirauch et al.(2013)
pTH3208
0.814
0.698
Cebpb
M01818_2.00
Mus musculus
VTKDYGYAAB
VTTRCRHMAB
PBM
Weirauch et al.(2014)
pTH5460
0.814
0.698
Cebpb
M02867_2.00
Mus musculus
VTTRCGCAAY
RTTGCGYAAB
SELEX
Jolma et al.(2013)
Cebpb_1
0.814
0.698
Cebpb
M08841_2.00
Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH
Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A
0.814
0.698
Cebpb
M09498_2.00
Mus musculus
GTTGYRCAAT
ATTGYRCAAC
Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512
0.814
0.698
Cebpb
M02633_2.00
Mus musculus
VTKDNGHAAB
VTTDCNHMAB
PBM
Tillo et al.(2017)
CEBPB_5hmC
0.814
0.698
Cebpb
M02634_2.00
Mus musculus
TKDYGYAAYN
NRTTRCRHMA
PBM
Tillo et al.(2017)
CEBPB_5mCG
0.814
0.698
Cebpb
M02635_2.00
Mus musculus
YKDYGHAAYN
NRTTDCRHMR
PBM
Tillo et al.(2017)
CEBPB_5mC
0.814
0.698
Cebpb
M00998_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPB_M_HK
0.814
0.698
Cebpa
M00994_2.00
Mus musculus
TTDCGCAA
TTGCGHAA
PBM
Mann et al.(2013)
CEBPA_UM_HK
0.792
0.698
Cebpa
M01811_2.00
Mus musculus
VTKDYRHMAB
VTKDYRHMAB
PBM
Weirauch et al.(2014)
pTH5166
0.792
0.698
CEBPA
M04045_2.00
Homo sapiens
NVTKRCGCAABN
NVTTGCGYMABN
SELEX
Rodriguez-Martinez et al.(2017)
CEBPA.1
0.792
0.698
CEBPA
M08076_2.00
Homo sapiens
DRTTDTGCAAY
RTTGCAHAAYH
ChIP-seq
Mathelier et al.(2014)
MA0102.3
0.792
0.698
CEBPA
M08813_2.00
Homo sapiens
NVTKKWGCAABN
NVTTGCWMMABN
Misc
Kulakovskiy et al.(2013)
CEBPA_HUMAN.H11MO.0.A
0.792
0.698
Cebpa
M08830_2.00
Mus musculus
DVTKDNGCAAB
VTTGCNHMABH
Misc
Kulakovskiy et al.(2013)
CEBPA_MOUSE.H11MO.0.A
0.792
0.698
CEBPA
M10023_2.00
Homo sapiens
NNNWHWVCAMWBN
NVWKTGBWDWNNN
Transfac
Matys et al.(2006)
V$CEBP_01
0.792
0.698
CEBPA
M10024_2.00
Homo sapiens
NNNTKDNSYAAHNN
NNDTTRSNHMANNN
Transfac
Matys et al.(2006)
V$CEBPA_01
0.792
0.698
CEBPA
M10025_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_04
0.792
0.698
CEBPA
M10026_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q4
0.792
0.698
CEBPA
M10027_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CEBPA_Q6
0.792
0.698
CEBPA
M10028_2.00
Homo sapiens
NGWVTKHBGYAAKVBAYD
HRTVBMTTRCVDMABWCN
Transfac
Matys et al.(2006)
V$CEBP_C
0.792
0.698
CEBPA
M10029_2.00
Homo sapiens
NNNTKDHSCAANNN
NNNTTGSDHMANNN
Transfac
Matys et al.(2006)
V$CEBP_Q2
0.792
0.698
Cebpa
M00993_2.00
Mus musculus
NTTDCGCAA
TTGCGHAAN
PBM
Mann et al.(2013)
CEBPA_M_HK
0.792
0.698
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000016445
bZIP
203
265
DSLEYRLRRERNNIAVRKSRDKAKRRIQETQQKVLEYMAENERLRSRVDQLTQELDTLRNLFR
Links
Other
bZIP
family TFs
Other
Sarcophilus harrisii
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m005982
Ricinus communis
29908.m005982
I
0.000
AGL104
Arabidopsis lyrata
Al_scaffold_0001_2320
I
0.000
AMTR_s00010p00214260
Amborella trichopoda
AMTR_s00010p00214260
I
0.000
Aquca_014_00554
Aquilegia coerulea
Aquca_014_00554
I
0.000
AGL104
Arabidopsis thaliana
AT1G22130
I
0.000
AGL66
Arabidopsis thaliana
AT1G77980
I
0.000
BGIOSGA003731
Oryza indica
BGIOSGA003731
I
0.000
BGIOSGA026745
Oryza indica
BGIOSGA026745
I
0.000
Bo6g121640
Brassica oleracea
Bo6g121640
I
0.000
Bo7g060150
Brassica oleracea
Bo7g060150
I
0.000
Bo8g071330
Brassica oleracea
Bo8g071330
I
0.000
Bostr.12659s0064
Boechera stricta
Bostr.12659s0064
I
0.000
Bostr.20129s0232
Boechera stricta
Bostr.20129s0232
I
0.000
Bra012308
Brassica rapa
Bra012308
I
0.000
Bra015643
Brassica rapa
Bra015643
I
0.000
Bra016386
Brassica rapa
Bra016386
I
0.000
BRADI3G39177
Brachypodium distachyon
BRADI3G39177
I
0.000
Cagra.0096s0037
Capsella grandiflora
Cagra.0096s0037
I
0.000
Cagra.1707s0007
Capsella grandiflora
Cagra.1707s0007
I
0.000
Carubv10010907m.g
Capsella rubella
Carubv10010907m.g
I
0.000
Carubv10021590m.g
Capsella rubella
Carubv10021590m.g
I
0.000
cassava22012.m1
Manihot esculenta
cassava22012.m1
I
0.000
cassava32041.m1
Manihot esculenta
cassava32041.m1
I
0.000
Ca_24539
Cicer arietinum
Ca_24539
I
0.000
Ciclev10003964m.g
Citrus clementina
Ciclev10003964m.g
I
0.000
Cla014721
Citrullus lanatus
Cla014721
I
0.000
AGL66
Arabidopsis lyrata
fgenesh2_kg.2__2091__AT1G77980.1
I
0.000
gene31290-v1.0-hybrid
Fragaria vesca
gene31290-v1.0-hybrid
I
0.000
GLYMA13G02170
Glycine max
GLYMA13G02170
I
0.000
GLYMA14G34160
Glycine max
GLYMA14G34160
I
0.000
Gorai.005G093000
Gossypium raimondii
Gorai.005G093000
I
0.000
Gorai.007G242000
Gossypium raimondii
Gorai.007G242000
I
0.000
GRMZM2G152415
Zea mays
GRMZM2G152415
I
0.000
GRMZM2G334225
Zea mays
GRMZM2G334225
I
0.000
GSMUA_Achr3G04450_001
Musa acuminata
GSMUA_Achr3G04450_001
I
0.000
GSMUA_Achr9G13010_001
Musa acuminata
GSMUA_Achr9G13010_001
I
0.000
LPERR06G07270
Leersia perrieri
LPERR06G07270
I
0.000
LPERR08G16000
Leersia perrieri
LPERR08G16000
I
0.000
Lus10016810.g
Linum usitatissimum
Lus10016810.g
I
0.000
Lus10022506.g
Linum usitatissimum
Lus10022506.g
I
0.000
MDP0000243965
Malus domestica
MDP0000243965
I
0.000
MTR_4g084740
Medicago truncatula
MTR_4g084740
I
0.000
OB06G17440
Oryza brachyantha
OB06G17440
I
0.000
OB08G26170
Oryza brachyantha
OB08G26170
I
0.000
OBART06G07860
Oryza barthii
OBART06G07860
I
0.000
OBART08G19110
Oryza barthii
OBART08G19110
I
0.000
OGLUM06G08350
Oryza glumaepatula
OGLUM06G08350
I
0.000
OGLUM08G20110
Oryza glumaepatula
OGLUM08G20110
I
0.000
OLONG_004474
Oryza longistaminata
OLONG_004474
I
0.000
OMERI06G09450
Oryza meridionalis
OMERI06G09450
I
0.000
ONIVA06G09080
Oryza nivara
ONIVA06G09080
I
0.000
ONIVA08G21050
Oryza nivara
ONIVA08G21050
I
0.000
OPUNC06G07570
Oryza punctata
OPUNC06G07570
I
0.000
orange1.1g039560m.g
Citrus sinensis
orange1.1g039560m.g
I
0.000
ORGLA06G0074200
Oryza glaberrima
ORGLA06G0074200
I
0.000
ORGLA08G0167200
Oryza glaberrima
ORGLA08G0167200
I
0.000
ORUFI06G08110
Oryza rufipogon
ORUFI06G08110
I
0.000
ORUFI08G21330
Oryza rufipogon
ORUFI08G21330
I
0.000
OS06G0223300
Oryza sativa
OS06G0223300
I
0.000
OS08G0494100
Oryza sativa
OS08G0494100
I
0.000
Pavir.Db01574
Panicum virgatum
Pavir.Db01574
I
0.000
Pavir.Fb01739
Panicum virgatum
Pavir.Fb01739
I
0.000
Pavir.J32837
Panicum virgatum
Pavir.J32837
I
0.000
Pm019181
Prunus mume
Pm019181
I
0.000
POPTR_0002s09290
Populus trichocarpa
POPTR_0002s09290
I
0.000
POPTR_0005s16500
Populus trichocarpa
POPTR_0005s16500
N
0.000
POPTR_0007s05980
Populus trichocarpa
POPTR_0007s05980
I
0.000
PRUPE_ppa007816mg
Prunus persica
PRUPE_ppa007816mg
I
0.000
SapurV1A.0010s0340
Salix purpurea
SapurV1A.0010s0340
I
0.000
SapurV1A.0293s0130
Salix purpurea
SapurV1A.0293s0130
I
0.000
Sb10g007810
Sorghum bicolor
Sb10g007810
I
0.000
Si008439m.g
Setaria italica
Si008439m.g
I
0.000
Si013985m.g
Setaria italica
Si013985m.g
I
0.000
TCM_001182
Theobroma cacao
TCM_001182
I
0.000
TCM_034970
Theobroma cacao
TCM_034970
I
0.000
Thhalv10019686m.g
Eutrema salsugineum
Thhalv10019686m.g
I
0.000
VIT_07s0031g01140
Vitis vinifera
VIT_07s0031g01140
I
0.000