CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

CREM *(Sus scrofa)* bZIP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00170 (bZIP_1)	IPR011616	ENSSSCG00000011106	T061423_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Crem M01821_2.00	Mus musculus	NRTKACGTMN	NKACGTMAYN	PBM Weirauch et al.(2014) pTH5002	0.906	1.000
CREM M04229_2.00	Homo sapiens	VVTBACGTVABN	NVTBACGTVABB	SELEX Yin et al.(2017) CREM_eDBD_HT-SELEX	0.911	1.000
Crem M08845_2.00	Mus musculus	SVVTGACGTSA	TSACGTCABBS	Misc Kulakovskiy et al.(2013) CREM_MOUSE.H11MO.0.C	0.906	1.000
CREM M08784_2.00	Homo sapiens	SVVTGACGTSA	TSACGTCABBS	Misc Kulakovskiy et al.(2013) CREM_HUMAN.H11MO.0.C	0.911	1.000
CREM M09930_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CREM_Q6_01	0.911	1.000
Creb1 M00992_2.00	Mus musculus	NNTGACGTCV	BGACGTCANN	PBM Mann et al.(2013) CREB1_UM_HK	0.882	0.950
CREM M09931_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CREM_Q6	0.911	1.000
Creb1 M01806_2.00	Mus musculus	VTKACGHNN	NNDCGTMAB	PBM Weirauch et al.(2014) pTH5080	0.882	0.950
CREB1 M04264_2.00	Homo sapiens	NVTKACGTMABN	NVTKACGTMABN	SELEX Yin et al.(2017) CREB1_FL_HT-SELEX	0.882	0.950
CREM M04230_2.00	Homo sapiens	NRTGACRTCAYN	NRTGAYGTCAYN	SELEX Yin et al.(2017) CREM_eDBD_Methyl-HT-SELEX	0.911	1.000
CREB1 M04258_2.00	Homo sapiens	NVTKACGTMANN	NNTKACGTMABN	SELEX Yin et al.(2017) CREB1_eDBD_HT-SELEX_1	0.882	0.950
CREB1 M04259_2.00	Homo sapiens	NRTGACGTR	YACGTCAYN	SELEX Yin et al.(2017) CREB1_eDBD_HT-SELEX_2	0.882	0.950
CREB1 M04260_2.00	Homo sapiens	VTSACRYGWBAY	RTVWCRYGTSAB	SELEX Yin et al.(2017) CREB1_eDBD_HT-SELEX_3	0.882	0.950
CREB1 M04022_2.00	Homo sapiens	NRTGACGTCAYN	NRTGACGTCAYN	SELEX Rodriguez-Martinez et al.(2017) CREB1.1	0.882	0.950
CREB1 M04023_2.00	Homo sapiens	RTGACGTADB	VHTACGTCAY	SELEX Rodriguez-Martinez et al.(2017) CREB1.2	0.882	0.950
CREB1 M08066_2.00	Homo sapiens	NVTGACGTCABN	NVTGACGTCABN	ChIP-seq Mathelier et al.(2014) MA0018.3	0.882	0.950
CREB1 M08791_2.00	Homo sapiens	WKRCGTCAYYN	NRRTGACGYMW	Misc Kulakovskiy et al.(2013) CREB1_HUMAN.H11MO.0.A	0.882	0.950
Creb1 M08824_2.00	Mus musculus	WKRCGTCAYYN	NRRTGACGYMW	Misc Kulakovskiy et al.(2013) CREB1_MOUSE.H11MO.0.A	0.882	0.950
CREB1 M09948_2.00	Homo sapiens	TGACGTMW	WKACGTCA	Transfac Matys et al.(2006) V$CREB_01	0.882	0.950
CREB1 M09949_2.00	Homo sapiens	BBGDTGACGYVV	BBRCGTCAHCVV	Transfac Matys et al.(2006) V$CREB_02	0.882	0.950
CREB1 M09950_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CREB1_Q3	0.882	0.950
CREB1 M09951_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$CREB1_Q6	0.882	0.950
CREB1 M09952_2.00	Homo sapiens	BSTGACGYARNN	NNYTRCGTCASV	Transfac Matys et al.(2006) V$CREB_Q2	0.882	0.950
CREB1 M09953_2.00	Homo sapiens	BSTGACGYMRBV	BVYKRCGTCASV	Transfac Matys et al.(2006) V$CREB_Q4	0.882	0.950
CREB1 M09954_2.00	Homo sapiens	KKGGGKTGACGYMND	HNKRCGTCAMCCCMM	Transfac Matys et al.(2006) V$TAXCREB_01	0.882	0.950
CREB1 M09955_2.00	Homo sapiens	RTGACGCATAYCCCC	GGGGRTATGCGTCAY	Transfac Matys et al.(2006) V$TAXCREB_02	0.882	0.950
Creb1 M00991_2.00	Mus musculus	NNRTGACGYVN	NBRCGTCAYNN	PBM Mann et al.(2013) CREB1_M_HK	0.882	0.950
CREB1 M04265_2.00	Homo sapiens	NRTGACRTCAYN	NRTGAYGTCAYN	SELEX Yin et al.(2017) CREB1_FL_Methyl-HT-SELEX	0.882	0.950
CREB1 M04261_2.00	Homo sapiens	BRTGAYGYGND	HNCRCRTCAYV	SELEX Yin et al.(2017) CREB1_eDBD_Methyl-HT-SELEX_1	0.882	0.950
CREB1 M04262_2.00	Homo sapiens	NRTGACRTCAYN	NRTGAYGTCAYN	SELEX Yin et al.(2017) CREB1_eDBD_Methyl-HT-SELEX_2	0.882	0.950
CREB1 M04263_2.00	Homo sapiens	NRTGACGYV	BRCGTCAYN	SELEX Yin et al.(2017) CREB1_eDBD_Methyl-HT-SELEX_3	0.882	0.950
ATF1 M08792_2.00	Homo sapiens	HBRCGTCAYHN	NDRTGACGYVD	Misc Kulakovskiy et al.(2013) ATF1_HUMAN.H11MO.0.B	0.880	0.850
ATF1 M09485_2.00	Homo sapiens	NVTGACGTMA	TKACGTCABN	Misc Heinz et al.(2010) K562-ATF1_GSE31477	0.880	0.850
ATF1 M09956_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF1_Q3	0.880	0.850
ATF1 M09957_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF1_Q6_01	0.880	0.850
ATF1 M09958_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ATF1_Q6	0.880	0.850
Atf1 M00124_2.00	Mus musculus	NNNNDNDNNN	NNNHNHNNNN	PBM Badis et al.(2009) Atf1_3026	0.869	0.850
Atf1 M01804_2.00	Mus musculus	RTGACGTV	BACGTCAY	PBM Weirauch et al.(2014) pTH5005	0.869	0.850
Atf1 M08820_2.00	Mus musculus	VTGACGTSAV	BTSACGTCAB	Misc Kulakovskiy et al.(2013) ATF1_MOUSE.H11MO.0.B	0.869	0.850
CrebB-17A M03659_2.00	Drosophila melanogaster	RTGACGTCAY	RTGACGTCAY	SELEX Nitta et al.(2015) CrebB-17A_1	0.814	0.683
CrebB-17A M03660_2.00	Drosophila melanogaster	RTGACGTCAY	RTGACGTCAY	SELEX Nitta et al.(2015) CrebB-17A_2	0.824	0.817
For this family, TFs with SR scores > 0.782* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSSSCP00000011843	bZIP	301	360	EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKA
ENSSSCP00000028843	bZIP	35	94	EATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT
ENSSSCP00000029005	bZIP	53	112	EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKA
ENSSSCP00000029744	bZIP	288	347	EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKA
ENSSSCP00000030043	bZIP	118	177	EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKA
ENSSSCP00000030520	bZIP	35	94	EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKA
ENSSSCP00000030567	bZIP	55	114	EATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKA
ENSSSCP00000030897	bZIP	288	347	EATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT
ENSSSCP00000031058	bZIP	53	112	EATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT

Links
Other bZIP family TFs
Other *Sus scrofa* TFs

360 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
gem	Drosophila melanogaster	FBgn0050011	D
GF12780	Drosophila ananassae	FBgn0089814	I
GG24145	Drosophila erecta	FBgn0116278	I
GI19314	Drosophila mojavensis	FBgn0142052	I
GL11578	Drosophila persimilis	FBgn0149187	I
GJ22192	Drosophila virilis	FBgn0209305	I
GK10687	Drosophila willistoni	FBgn0212700	I
GE19341	Drosophila yakuba	FBgn0236687	I
GA24777	Drosophila pseudoobscura	FBgn0246163	I
MDOA006741	Musca domestica	MDOA006741	I

CREM (Sus scrofa) bZIP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

360 Related TFs

CREM **(Sus scrofa)
bZIP**