CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA006741
(
Musca domestica
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
MDOA006741
T199663_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gem
M03769_2.00
Drosophila melanogaster
DAACYRGTTHDAACYRGWTH
DAWCYRGTTHDAACYRGTTH
SELEX
Nitta et al.(2015)
gem_1
0.729
0.729
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA006741-PA
Grainyhead
415
619
SKIEQSPLGRSSGNSGAPAGATTAAANSDDYKFQYILAAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSMYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDLPLSYGLCHVSQPLNPNYLNTVEIFWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENNNNNNNNITNNTTTAAANTPI
MDOA006741-PA
Grainyhead
689
731
LASGLKPPMPIHAAACQVKVFKLKGADRKHKQDREKIQKRPQS
Links
Other
Grainyhead
family TFs
Other
Musca domestica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LCUP002159
Lucilia cuprina
LCUP002159
N
0.784
GE19341
Drosophila yakuba
FBgn0236687
I
0.751
gem
Drosophila melanogaster
FBgn0050011
D
0.748
GF12780
Drosophila ananassae
FBgn0089814
I
0.737
GJ22192
Drosophila virilis
FBgn0209305
I
0.736
GL11578
Drosophila persimilis
FBgn0149187
I
0.734
GA24777
Drosophila pseudoobscura
FBgn0246163
I
0.734
GM21189
Drosophila sechellia
FBgn0176070
I
0.733
GG24145
Drosophila erecta
FBgn0116278
I
0.729
GH21767
Drosophila grimshawi
FBgn0129228
I
0.729
GD10717
Drosophila simulans
FBgn0182481
I
0.729
GI19314
Drosophila mojavensis
FBgn0142052
I
0.720
GK10687
Drosophila willistoni
FBgn0212700
I
0.715