ATF3 (Sus scrofa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSSCG00000015595 T061431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.929 0.984
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.823 1.000
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.929 0.984
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.823 1.000
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.929 0.984
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.823 1.000
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.881 0.742
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.823 1.000
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.881 0.742
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.881 0.742
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.881 0.742
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.881 0.742
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.823 1.000
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.881 0.742
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.823 1.000
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.881 0.742
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.823 1.000
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.881 0.742
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.823 1.000
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.881 0.742
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.823 1.000
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.881 0.742
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.823 1.000
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.881 0.742
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.823 1.000
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.881 0.742
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.823 1.000
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.879 0.742
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.823 1.000
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.879 0.742
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.823 1.000
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.879 0.742
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.823 1.000
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.879 0.742
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.823 1.000
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.879 0.742
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.789 0.565
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000016534 bZIP 84 145
ENSSSCP00000028528 bZIP 55 87
ENSSSCP00000028980 bZIP 27 89

Links

Other bZIP family TFs
Other Sus scrofa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002902 Aedes aegypti AAEL002902 I
AALB010655 Anopheles albimanus AALB010655 I
Aan_R001044 Calypte anna Aan_R001044 I
Aan_R002857 Calypte anna Aan_R002857 I
AARA000771 Anopheles arabiensis AARA000771 I
AATE005140 Anopheles atroparvus AATE005140 I
ACEP23430 Atta cephalotes ACEP23430 I
ACHR006076 Anopheles christyi ACHR006076 I
ACOM023427 Anopheles coluzzii ACOM023427 I
ACUA022223 Anopheles culicifacies ACUA022223 I
ACYPI001448 Acyrthosiphon pisum ACYPI001448 I
ADIR004364 Anopheles dirus ADIR004364 I
AEPI000695 Anopheles epiroticus AEPI000695 I
AFAF020800 Anopheles farauti AFAF020800 I
Afo_R010658 Aptenodytes forsteri Afo_R010658 I
AFUN009694 Anopheles funestus AFUN009694 I
AGAP011985 Anopheles gambiae AGAP011985 I
Alligator_sinensis_CCG002585.1 Alligator sinensis Alligator_sinensis_CCG002585.1 I
Alligator_sinensis_CCG008488.1 Alligator sinensis Alligator_sinensis_CCG008488.1 I
AMEC000330 Anopheles melas AMEC000330 I
AMEM016167 Anopheles merus AMEM016167 I
AMIN004405 Anopheles minimus AMIN004405 I
AQUA008654 Anopheles quadriannulatus AQUA008654 I
ASTEI05879 Anopheles stephensi ASTEI05879 I
BGLB003400 Biomphalaria glabrata BGLB003400 I
BGLB010605 Biomphalaria glabrata BGLB010605 I
Brh_R012765 Buceros rhinoceros Brh_R012765 I
CapteG111042 Capitella teleta CapteG111042 I
CapteG154829 Capitella teleta CapteG154829 I
Cflo_04586--NP_001011637.1_APIME Camponotus floridanus Cflo_04586--NP_001011637.1_APIME I
CGI_10006631 Crassostrea gigas CGI_10006631 I
CGI_10013641 Crassostrea gigas CGI_10013641 I
CLEC011700 Cimex lectularius CLEC011700 I
Cmyd_10006750 Chelonia mydas Cmyd_10006750 I
CPIJ012827 Culex quinquefasciatus CPIJ012827 I
CpipJ_CPIJ012827 Culex pipiens CpipJ_CPIJ012827 I
CpipJ_CPIJ012828 Culex pipiens CpipJ_CPIJ012828 I
D915_00417 Fasciola hepatica D915_00417 I
D917_00468 Trichinella nativa D917_00468 I
D918_07072 Trichuris suis D918_07072 I
DAPPUDRAFT_320202 Daphnia pulex DAPPUDRAFT_320202 I
ECANG7_02703 Echinococcus canadensis ECANG7_02703 I
EFV58362 Trichinella spiralis EFV58362 I
ENSACAG00000009715 Anolis carolinensis ENSACAG00000009715 I
twist1 Anolis carolinensis ENSACAG00000011825 I
ENSACAG00000015086 Anolis carolinensis ENSACAG00000015086 I
ENSAMEG00000008556 Ailuropoda melanoleuca ENSAMEG00000008556 I
ENSAMEG00000020165 Ailuropoda melanoleuca ENSAMEG00000020165 I
ENSAMXG00000024993 Astyanax mexicanus ENSAMXG00000024993 I
ENSAMXG00000025039 Astyanax mexicanus ENSAMXG00000025039 I
ENSAMXG00000025095 Astyanax mexicanus ENSAMXG00000025095 I
ENSAMXG00000025610 Astyanax mexicanus ENSAMXG00000025610 I
ENSAMXG00000025657 Astyanax mexicanus ENSAMXG00000025657 I
ENSAPLG00000000878 Anas platyrhynchos ENSAPLG00000000878 I
ENSAPLG00000007177 Anas platyrhynchos ENSAPLG00000007177 I
TWIST2 Bos taurus ENSBTAG00000021444 I
TWIST1 Bos taurus ENSBTAG00000046922 I
TWIST2 Canis familiaris ENSCAFG00000012469 I
TWIST2 Callithrix jacchus ENSCJAG00000023006 I
TWIST2 Cavia porcellus ENSCPOG00000025980 I
ENSCSAG00000018801 Chlorocebus sabaeus ENSCSAG00000018801 I
ENSCSAG00000019610 Chlorocebus sabaeus ENSCSAG00000019610 I
twist3 Danio rerio ENSDARG00000019646 I
twist1a Danio rerio ENSDARG00000030402 I
twist1b Danio rerio ENSDARG00000076010 I
twist2 Danio rerio ENSDARG00000078266 I
TWIST2 Dasypus novemcinctus ENSDNOG00000002434 I
TWIST1 Dasypus novemcinctus ENSDNOG00000037354 I
ENSDORG00000012866 Dipodomys ordii ENSDORG00000012866 I
TWIST1 Erinaceus europaeus ENSEEUG00000015333 I
TWIST2 Echinops telfairi ENSETEG00000009809 I
ENSETEG00000013115 Echinops telfairi ENSETEG00000013115 I
ENSFALG00000009781 Ficedula albicollis ENSFALG00000009781 I
ENSFALG00000014990 Ficedula albicollis ENSFALG00000014990 I
ENSFALG00000015081 Ficedula albicollis ENSFALG00000015081 I
TWIST1 Homo sapiens ENSG00000122691 D
TWIST2 Homo sapiens ENSG00000233608 I
twist2 Gasterosteus aculeatus ENSGACG00000002227 I
twist3b Gasterosteus aculeatus ENSGACG00000004773 I
TWIST1 Gasterosteus aculeatus ENSGACG00000006420 I
twist3 Gasterosteus aculeatus ENSGACG00000007963 I
twist1b Gasterosteus aculeatus ENSGACG00000008070 I
ENSGALG00000004274 Gallus gallus ENSGALG00000004274 I
ENSGALG00000026059 Gallus gallus ENSGALG00000026059 I
ENSGMOG00000002790 Gadus morhua ENSGMOG00000002790 I
ENSGMOG00000003155 Gadus morhua ENSGMOG00000003155 I
ENSLACG00000012096 Latimeria chalumnae ENSLACG00000012096 I
ENSLACG00000013366 Latimeria chalumnae ENSLACG00000013366 I
TWIST2 Loxodonta africana ENSLAFG00000032174 I
ENSLOCG00000017835 Lepisosteus oculatus ENSLOCG00000017835 I
ENSLOCG00000018198 Lepisosteus oculatus ENSLOCG00000018198 I
ENSLOCG00000018350 Lepisosteus oculatus ENSLOCG00000018350 I
ENSMEUG00000013853 Macropus eugenii ENSMEUG00000013853 I
ENSMGAG00000002218 Meleagris gallopavo ENSMGAG00000002218 I
TWIST1 Myotis lucifugus ENSMLUG00000007047 I
TWIST2 Myotis lucifugus ENSMLUG00000023316 I
TWIST1 Macaca mulatta ENSMMUG00000011173 I
TWIST2 Macaca mulatta ENSMMUG00000021909 I
ENSMODG00000001412 Monodelphis domestica ENSMODG00000001412 I
TWIST1 Monodelphis domestica ENSMODG00000023924 I
ENSMPUG00000019429 Mustela putorius furo ENSMPUG00000019429 I
Twist2 Mus musculus ENSMUSG00000007805 D
Twist1 Mus musculus ENSMUSG00000035799 D
ENSNLEG00000011342 Nomascus leucogenys ENSNLEG00000011342 I
ENSNLEG00000019264 Nomascus leucogenys ENSNLEG00000019264 I
TWIST1 Ornithorhynchus anatinus ENSOANG00000009614 I
ENSOANG00000012950 Ornithorhynchus anatinus ENSOANG00000012950 I
ENSOARG00000000265 Ovis aries ENSOARG00000000265 I
ENSOARG00000009754 Ovis aries ENSOARG00000009754 I
TWIST2 Oryctolagus cuniculus ENSOCUG00000004073 I
TWIST2 Otolemur garnettii ENSOGAG00000029007 I
ENSONIG00000020502 Oreochromis niloticus ENSONIG00000020502 I
ENSONIG00000020610 Oreochromis niloticus ENSONIG00000020610 I
ENSONIG00000021177 Oreochromis niloticus ENSONIG00000021177 I
ENSONIG00000021342 Oreochromis niloticus ENSONIG00000021342 I
TWIST2 Ochotona princeps ENSOPRG00000017069 I
TWIST1 Oryzias latipes ENSORLG00000004012 I
twist1 Oryzias latipes ENSORLG00000007251 I
twist3 Oryzias latipes ENSORLG00000016373 I
twist2 Oryzias latipes ENSORLG00000018096 I
ENSP00000405176-D1 Bos grunniens ENSP00000405176-D1 I
ENSPANG00000001578 Papio anubis ENSPANG00000001578 I
ENSPFOG00000019887 Poecilia formosa ENSPFOG00000019887 I
ENSPFOG00000020053 Poecilia formosa ENSPFOG00000020053 I
ENSPFOG00000020314 Poecilia formosa ENSPFOG00000020314 I
ENSPFOG00000020501 Poecilia formosa ENSPFOG00000020501 I
ENSPMAG00000003993 Petromyzon marinus ENSPMAG00000003993 I
ENSPMAG00000010126 Petromyzon marinus ENSPMAG00000010126 I
ENSPPYG00000017754 Pongo abelii ENSPPYG00000017754 I
ENSPSIG00000012843 Pelodiscus sinensis ENSPSIG00000012843 I
ENSPTRG00000018960 Pan troglodytes ENSPTRG00000018960 I
TWIST2 Pan troglodytes ENSPTRG00000033910 I
TWIST1 Pteropus vampyrus ENSPVAG00000001710 I
Twist1 Rattus norvegicus ENSRNOG00000011101 I
Twist2 Rattus norvegicus ENSRNOG00000020355 I
ENSSHAG00000003328 Sarcophilus harrisii ENSSHAG00000003328 I
TWIST1 Sus scrofa ENSSSCG00000015370 I
TWIST2 Sus scrofa ENSSSCG00000016343 I
ENSSTOG00000004633 Ictidomys tridecemlineatus ENSSTOG00000004633 I
TWIST1 Taeniopygia guttata ENSTGUG00000002643 I
ENSTGUG00000003194 Taeniopygia guttata ENSTGUG00000003194 I
ENSTGUG00000003756 Taeniopygia guttata ENSTGUG00000003756 I
twist3 Tetraodon nigroviridis ENSTNIG00000000441 I
twist2 Tetraodon nigroviridis ENSTNIG00000001562 I
TWIST1 Tetraodon nigroviridis ENSTNIG00000001678 I
twist1b Tetraodon nigroviridis ENSTNIG00000018440 I
twist2 Takifugu rubripes ENSTRUG00000006090 I
twist3 Takifugu rubripes ENSTRUG00000011374 I
twist3 Takifugu rubripes ENSTRUG00000012607 I
twist1 Takifugu rubripes ENSTRUG00000015797 I
ENSXMAG00000019787 Xiphophorus maculatus ENSXMAG00000019787 I
ENSXMAG00000019956 Xiphophorus maculatus ENSXMAG00000019956 I
ENSXMAG00000019999 Xiphophorus maculatus ENSXMAG00000019999 I
ENSXMAG00000020062 Xiphophorus maculatus ENSXMAG00000020062 I
ENSXMAG00000020142 Xiphophorus maculatus ENSXMAG00000020142 I
estExt_gwp.C_4170045 Branchiostoma floridae estExt_gwp.C_4170045 I
twi Drosophila melanogaster FBgn0003900 D
twi Drosophila simulans FBgn0016355 I
twi Drosophila virilis FBgn0020065 I
twi Drosophila erecta FBgn0064598 I
twi Drosophila yakuba FBgn0084444 I
GF13559 Drosophila ananassae FBgn0090588 I
GH20971 Drosophila grimshawi FBgn0128433 I
GI21307 Drosophila mojavensis FBgn0144037 I
GL11229 Drosophila persimilis FBgn0148838 I
GM15978 Drosophila sechellia FBgn0170894 I
GK19547 Drosophila willistoni FBgn0221545 I
twi Drosophila pseudoobscura FBgn0243556 I
fgenesh2_pm.scaffold_217000008 Branchiostoma floridae fgenesh2_pm.scaffold_217000008 I
GB40416 Apis mellifera GB40416 I
Gfo_R012065 Geospiza fortis Gfo_R012065 I
Gfo_R014393 Geospiza fortis Gfo_R014393 I
Hsal_01530--NP_001011637.1_APIME Harpegnathos saltator Hsal_01530--NP_001011637.1_APIME I
ISCW009433 Ixodes scapularis ISCW009433 I
L798_05856 Zootermopsis nevadensis L798_05856 I
LCUP006189 Lucilia cuprina LCUP006189 I
LDEC006528 Leptinotarsa decemlineata LDEC006528 I
MDOA005417 Musca domestica MDOA005417 I
Myotis_brandtii_Twist1_10031742 Myotis brandtii Myotis_brandtii_Twist1_10031742 I
NEMVEDRAFT_v1g234699 Nematostella vectensis NEMVEDRAFT_v1g234699 I
NV10141 Nasonia vitripennis NV10141 I
Ocbimv22015922m.g Octopus bimaculoides Ocbimv22015922m.g I
Ogr06591 Ophisaurus gracilis Ogr06591 I
Ogr11552 Ophisaurus gracilis Ogr11552 I
Ogr11553 Ophisaurus gracilis Ogr11553 I
PHUM396880 Pediculus humanus PHUM396880 I
PPAI007734 Phlebotomus papatasi PPAI007734 N
Pvit_02271 Pogona vitticeps Pvit_02271 I
PXEA_0000232401 Protopolystoma xenopodis PXEA_0000232401 I
RPRC000323 Rhodnius prolixus RPRC000323 I
Sakowv30001350m.g Saccoglossus kowalevskii Sakowv30001350m.g I
SCUD_0002255501 Schistosoma curassoni SCUD_0002255501 I
SINV20920 Solenopsis invicta SINV20920 I
SPU_030059 Strongylocentrotus purpuratus SPU_030059 I
TC014598 Tribolium castaneum TC014598 I
TMUE_s0004013100 Trichuris muris TMUE_s0004013100 I
TRE_0001282801 Trichobilharzia regenti TRE_0001282801 I
TTAC_0000855201 Hydatigera taeniaeformis TTAC_0000855201 I
TTRE_0000397101 Trichuris trichiura TTRE_0000397101 I
twist1 Xenopus tropicalis XB-GENE-479802 I
twist2 Xenopus tropicalis XB-GENE-5878700 I
twist1.L Xenopus laevis XB-GENE-6255840 I
twist1.S Xenopus laevis XB-GENE-865309 I
YQE_04855 Dendroctonus ponderosae YQE_04855 I