XBP1 (Tetraodon nigroviridis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSTNIG00000015621 T061624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XBP1
M02825_2.00 		Homo sapiens
GVTGACGTCABB
VVTGACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_1 		0.849 0.797
XBP1
M02826_2.00 		Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_2 		0.849 0.797
XBP1
M02730_2.00 		Homo sapiens
GACGTGKCNNW
WNNGMCACGTC		 SELEX
Jolma et al.(2010)
XBP1_monomer 		0.849 0.797
XBP1
M04231_2.00 		Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1 		0.849 0.797
XBP1
M04232_2.00 		Homo sapiens
NVTKACGTMABV
BVTKACGTMABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2 		0.849 0.797
XBP1
M04010_2.00 		Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1 		0.849 0.797
XBP1
M04011_2.00 		Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2 		0.849 0.797
XBP1
M04012_2.00 		Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3 		0.849 0.797
XBP1
M09932_2.00 		Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN		 Transfac
Matys et al.(2006)
V$HTF_01 		0.849 0.797
XBP1
M09933_2.00 		Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH		 Transfac
Matys et al.(2006)
V$XBP1_01 		0.849 0.797
XBP1
M04233_2.00 		Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1 		0.849 0.797
XBP1
M04234_2.00 		Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2 		0.849 0.797
Xbp1
M00757_2.00 		Mus musculus
NNHBAYDNNN
NNNHRTVDNN		 PBM
Weirauch et al.(2013)
pTH2852 		0.849 0.781
Xbp1
M01802_2.00 		Mus musculus
NHNACGYNN
NNRCGTNDN		 PBM
Weirauch et al.(2014)
pTH5019 		0.849 0.781
Xbp1
M08818_2.00 		Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC		 Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C 		0.849 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000018695 bZIP 67 130

Links

Other bZIP family TFs
Other Tetraodon nigroviridis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_004890 Trichomonas vaginalis TVAG_004890 N
TVAG_013140 Trichomonas vaginalis TVAG_013140 N
TVAG_015500 Trichomonas vaginalis TVAG_015500 N
TVAG_023770 Trichomonas vaginalis TVAG_023770 N
TVAG_025000 Trichomonas vaginalis TVAG_025000 N
TVAG_025550 Trichomonas vaginalis TVAG_025550 N
TVAG_030020 Trichomonas vaginalis TVAG_030020 N
TVAG_039560 Trichomonas vaginalis TVAG_039560 N
TVAG_058110 Trichomonas vaginalis TVAG_058110 N
TVAG_061160 Trichomonas vaginalis TVAG_061160 N
TVAG_061500 Trichomonas vaginalis TVAG_061500 N
TVAG_082960 Trichomonas vaginalis TVAG_082960 N
TVAG_084950 Trichomonas vaginalis TVAG_084950 N
TVAG_086940 Trichomonas vaginalis TVAG_086940 N
TVAG_087000 Trichomonas vaginalis TVAG_087000 N
TVAG_127090 Trichomonas vaginalis TVAG_127090 N
TVAG_128390 Trichomonas vaginalis TVAG_128390 N
TVAG_129330 Trichomonas vaginalis TVAG_129330 N
TVAG_144980 Trichomonas vaginalis TVAG_144980 N
TVAG_153090 Trichomonas vaginalis TVAG_153090 N
TVAG_166300 Trichomonas vaginalis TVAG_166300 N
TVAG_173870 Trichomonas vaginalis TVAG_173870 N
TVAG_181780 Trichomonas vaginalis TVAG_181780 N
TVAG_188450 Trichomonas vaginalis TVAG_188450 N
TVAG_194040 Trichomonas vaginalis TVAG_194040 N
TVAG_211660 Trichomonas vaginalis TVAG_211660 N
TVAG_221490 Trichomonas vaginalis TVAG_221490 N
TVAG_233200 Trichomonas vaginalis TVAG_233200 N
TVAG_235610 Trichomonas vaginalis TVAG_235610 N
TVAG_240340 Trichomonas vaginalis TVAG_240340 N
TVAG_261430 Trichomonas vaginalis TVAG_261430 N
TVAG_280330 Trichomonas vaginalis TVAG_280330 N
TVAG_281260 Trichomonas vaginalis TVAG_281260 N
TVAG_295950 Trichomonas vaginalis TVAG_295950 N
TVAG_303230 Trichomonas vaginalis TVAG_303230 N
TVAG_308260 Trichomonas vaginalis TVAG_308260 N
TVAG_312660 Trichomonas vaginalis TVAG_312660 N
TVAG_313380 Trichomonas vaginalis TVAG_313380 N
TVAG_326570 Trichomonas vaginalis TVAG_326570 N
TVAG_326800 Trichomonas vaginalis TVAG_326800 N
TVAG_328780 Trichomonas vaginalis TVAG_328780 N
TVAG_331740 Trichomonas vaginalis TVAG_331740 N
TVAG_333450 Trichomonas vaginalis TVAG_333450 N
TVAG_338900 Trichomonas vaginalis TVAG_338900 N
TVAG_340190 Trichomonas vaginalis TVAG_340190 N
TVAG_346910 Trichomonas vaginalis TVAG_346910 N
TVAG_349200 Trichomonas vaginalis TVAG_349200 N
TVAG_355900 Trichomonas vaginalis TVAG_355900 N
TVAG_380560 Trichomonas vaginalis TVAG_380560 N
TVAG_384250 Trichomonas vaginalis TVAG_384250 N
TVAG_384530 Trichomonas vaginalis TVAG_384530 N
TVAG_395570 Trichomonas vaginalis TVAG_395570 N
TVAG_409410 Trichomonas vaginalis TVAG_409410 N
TVAG_416350 Trichomonas vaginalis TVAG_416350 N
TVAG_439010 Trichomonas vaginalis TVAG_439010 N
TVAG_441410 Trichomonas vaginalis TVAG_441410 N
TVAG_449380 Trichomonas vaginalis TVAG_449380 N
TVAG_455990 Trichomonas vaginalis TVAG_455990 N
TVAG_456020 Trichomonas vaginalis TVAG_456020 N
TVAG_458920 Trichomonas vaginalis TVAG_458920 N
TVAG_481120 Trichomonas vaginalis TVAG_481120 N
TVAG_481810 Trichomonas vaginalis TVAG_481810 N
TVAG_487640 Trichomonas vaginalis TVAG_487640 N
TVAG_506330 Trichomonas vaginalis TVAG_506330 N
TVAG_526330 Trichomonas vaginalis TVAG_526330 N
TVAG_549750 Trichomonas vaginalis TVAG_549750 N
TVAG_565940 Trichomonas vaginalis TVAG_565940 N
TVAG_575030 Trichomonas vaginalis TVAG_575030 N