CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000007848
(
Xiphophorus maculatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSXMAG00000007848
T061820_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.896
0.967
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.896
0.967
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.896
0.967
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.896
0.967
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.896
0.967
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.896
0.967
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.896
0.967
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.896
0.967
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.896
0.967
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.896
0.967
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.896
0.967
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.896
0.967
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.896
0.967
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.896
0.967
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.896
0.967
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.896
0.967
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.896
0.967
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.896
0.967
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.896
0.967
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.896
0.967
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.896
0.967
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.896
0.967
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.896
0.967
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.896
0.967
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.894
0.867
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.894
0.867
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.894
0.867
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.894
0.867
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.894
0.867
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.892
0.950
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.892
0.950
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.883
0.867
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.883
0.867
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.883
0.867
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.862
0.767
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.862
0.767
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.862
0.767
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.862
0.767
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.862
0.767
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.829
0.817
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.829
0.817
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000007870
bZIP
257
316
EVTRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKS
Links
Other
bZIP
family TFs
Other
Xiphophorus maculatus
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29693.m001968
Ricinus communis
29693.m001968
I
0.000
30138.m003959
Ricinus communis
30138.m003959
I
0.000
AC205574.3_FG006
Zea mays
AC205574.3_FG006
I
0.000
AMTR_s00092p00113360
Amborella trichopoda
AMTR_s00092p00113360
I
0.000
Aquca_057_00119
Aquilegia coerulea
Aquca_057_00119
I
0.000
TCP5
Arabidopsis thaliana
AT5G60970
D
0.000
PCF5
Oryza indica
BGIOSGA002128
I
0.000
PCF6
Oryza indica
BGIOSGA013684
I
0.000
PCF8
Oryza indica
BGIOSGA037799
I
0.000
Bo1g019520
Brassica oleracea
Bo1g019520
I
0.000
Bo2g161240
Brassica oleracea
Bo2g161240
I
0.000
Bo3g147760
Brassica oleracea
Bo3g147760
I
0.000
Bo7g098260
Brassica oleracea
Bo7g098260
I
0.000
Bo7g105960
Brassica oleracea
Bo7g105960
I
0.000
Bostr.1460s0130
Boechera stricta
Bostr.1460s0130
I
0.000
Bostr.26833s0140
Boechera stricta
Bostr.26833s0140
I
0.000
Bostr.30275s0311
Boechera stricta
Bostr.30275s0311
I
0.000
Bra010789
Brassica rapa
Bra010789
I
0.000
Bra012600
Brassica rapa
Bra012600
I
0.000
Bra012990
Brassica rapa
Bra012990
I
0.000
Bra029344
Brassica rapa
Bra029344
I
0.000
BRADI1G06460
Brachypodium distachyon
BRADI1G06460
I
0.000
BRADI1G58450
Brachypodium distachyon
BRADI1G58450
I
0.000
BRADI4G01547
Brachypodium distachyon
BRADI4G01547
I
0.000
Cagra.0083s0006
Capsella grandiflora
Cagra.0083s0006
I
0.000
Cagra.3678s0010
Capsella grandiflora
Cagra.3678s0010
I
0.000
Carubv10011113m.g
Capsella rubella
Carubv10011113m.g
I
0.000
Carubv10026656m.g
Capsella rubella
Carubv10026656m.g
I
0.000
cassava2420.valid.m1
Manihot esculenta
cassava2420.valid.m1
I
0.000
cassava7638.valid.m1
Manihot esculenta
cassava7638.valid.m1
I
0.000
Ca_00482
Cicer arietinum
Ca_00482
I
0.000
Ca_05033
Cicer arietinum
Ca_05033
I
0.000
Ca_13216
Cicer arietinum
Ca_13216
I
0.000
Ca_24196
Cicer arietinum
Ca_24196
I
0.000
Ciclev10014986m.g
Citrus clementina
Ciclev10014986m.g
I
0.000
Cla019865
Citrullus lanatus
Cla019865
I
0.000
Cucsa.047860
Cucumis sativus
Cucsa.047860
I
0.000
Cucsa.111880
Cucumis sativus
Cucsa.111880
I
0.000
evm.TU.supercontig_17.1
Carica papaya
evm.TU.supercontig_17.1
I
0.000
evm.TU.supercontig_94.62
Carica papaya
evm.TU.supercontig_94.62
I
0.000
TCP2
Arabidopsis lyrata
fgenesh2_kg.7__2455__AT4G18390.1
D
0.000
TCP5
Arabidopsis lyrata
fgenesh2_kg.8__2066__AT5G60970.1
D
0.000
gene04255-v1.0-hybrid
Fragaria vesca
gene04255-v1.0-hybrid
I
0.000
gene30370-v1.0-hybrid
Fragaria vesca
gene30370-v1.0-hybrid
I
0.000
GLYMA05G27367
Glycine max
GLYMA05G27367
I
0.000
GLYMA08G10350
Glycine max
GLYMA08G10350
I
0.000
GLYMA08G27155
Glycine max
GLYMA08G27155
I
0.000
GLYMA13G29160
Glycine max
GLYMA13G29160
I
0.000
GLYMA15G09910
Glycine max
GLYMA15G09910
I
0.000
GLYMA18G50371
Glycine max
GLYMA18G50371
I
0.000
Gorai.001G076700
Gossypium raimondii
Gorai.001G076700
I
0.000
Gorai.009G153900
Gossypium raimondii
Gorai.009G153900
I
0.000
Gorai.011G046000
Gossypium raimondii
Gorai.011G046000
I
0.000
GRMZM2G020805
Zea mays
GRMZM2G020805
I
0.000
GRMZM2G089361
Zea mays
GRMZM2G089361
I
0.000
GRMZM2G115516
Zea mays
GRMZM2G115516
I
0.000
GRMZM2G148022
Zea mays
GRMZM2G148022
I
0.000
GRMZM2G180568
Zea mays
GRMZM2G180568
I
0.000
GSMUA_Achr2G12990_001
Musa acuminata
GSMUA_Achr2G12990_001
I
0.000
GSMUA_Achr4G22960_001
Musa acuminata
GSMUA_Achr4G22960_001
I
0.000
GSMUA_Achr4G31520_001
Musa acuminata
GSMUA_Achr4G31520_001
I
0.000
GSMUA_Achr5G02530_001
Musa acuminata
GSMUA_Achr5G02530_001
I
0.000
GSMUA_Achr7G01160_001
Musa acuminata
GSMUA_Achr7G01160_001
I
0.000
GSMUA_Achr7G13980_001
Musa acuminata
GSMUA_Achr7G13980_001
I
0.000
LjT20A21.20.nc
Lotus japonicus
LjT20A21.20.nc
D
0.000
LPERR01G06830
Leersia perrieri
LPERR01G06830
I
0.000
LPERR03G30870
Leersia perrieri
LPERR03G30870
I
0.000
LPERR07G02820
Leersia perrieri
LPERR07G02820
I
0.000
LPERR12G15920
Leersia perrieri
LPERR12G15920
I
0.000
Lus10023297.g
Linum usitatissimum
Lus10023297.g
I
0.000
Lus10034679.g
Linum usitatissimum
Lus10034679.g
I
0.000
MDP0000155433
Malus domestica
MDP0000155433
I
0.000
MDP0000287069
Malus domestica
MDP0000287069
I
0.000
MDP0000927314
Malus domestica
MDP0000927314
I
0.000
mgf007729m
Mimulus guttatus
mgf007729m
I
0.000
mgf016959m
Mimulus guttatus
mgf016959m
I
0.000
mgf024988m
Mimulus guttatus
mgf024988m
I
0.000
MLOC_10214
Hordeum vulgare
MLOC_10214
I
0.000
MLOC_63989
Hordeum vulgare
MLOC_63989
I
0.000
MLOC_72581
Hordeum vulgare
MLOC_72581
I
0.000
MTR_2g090960
Medicago truncatula
MTR_2g090960
I
0.000
MTR_3g026050
Medicago truncatula
MTR_3g026050
I
0.000
MTR_4g109660
Medicago truncatula
MTR_4g109660
I
0.000
OBART01G07230
Oryza barthii
OBART01G07230
I
0.000
OBART02G32460
Oryza barthii
OBART02G32460
I
0.000
OBART12G00580
Oryza barthii
OBART12G00580
I
0.000
OGLUM01G08160
Oryza glumaepatula
OGLUM01G08160
I
0.000
OGLUM03G36280
Oryza glumaepatula
OGLUM03G36280
I
0.000
OGLUM12G00790
Oryza glumaepatula
OGLUM12G00790
I
0.000
OGLUM12G20570
Oryza glumaepatula
OGLUM12G20570
I
0.000
OLONG_003082
Oryza longistaminata
OLONG_003082
I
0.000
OMERI01G07200
Oryza meridionalis
OMERI01G07200
I
0.000
OMERI02G31110
Oryza meridionalis
OMERI02G31110
I
0.000
OMERI03G33790
Oryza meridionalis
OMERI03G33790
I
0.000
OMERI04G02350
Oryza meridionalis
OMERI04G02350
N
0.000
OMERI07G02020
Oryza meridionalis
OMERI07G02020
I
0.000
OMERI12G13760
Oryza meridionalis
OMERI12G13760
I
0.000
ONIVA01G09270
Oryza nivara
ONIVA01G09270
I
0.000
ONIVA03G37780
Oryza nivara
ONIVA03G37780
I
0.000
ONIVA11G00470
Oryza nivara
ONIVA11G00470
I
0.000
ONIVA12G17870
Oryza nivara
ONIVA12G17870
I
0.000
OPUNC01G06940
Oryza punctata
OPUNC01G06940
I
0.000
OPUNC07G03260
Oryza punctata
OPUNC07G03260
I
0.000
OPUNC12G17090
Oryza punctata
OPUNC12G17090
I
0.000
orange1.1g009938m.g
Citrus sinensis
orange1.1g009938m.g
I
0.000
ORGLA01G0062300
Oryza glaberrima
ORGLA01G0062300
I
0.000
ORGLA03G0335700
Oryza glaberrima
ORGLA03G0335700
I
0.000
ORGLA12G0161900
Oryza glaberrima
ORGLA12G0161900
I
0.000
ORUFI01G07780
Oryza rufipogon
ORUFI01G07780
I
0.000
ORUFI03G38070
Oryza rufipogon
ORUFI03G38070
I
0.000
ORUFI07G02160
Oryza rufipogon
ORUFI07G02160
N
0.000
ORUFI12G00880
Oryza rufipogon
ORUFI12G00880
I
0.000
ORUFI12G21090
Oryza rufipogon
ORUFI12G21090
I
0.000
OS01G0213800
Oryza sativa
OS01G0213800
D
0.000
PCF6
Oryza sativa
OS03G0785800
I
0.000
Pavir.Ba03864
Panicum virgatum
Pavir.Ba03864
I
0.000
Pavir.Ca02949
Panicum virgatum
Pavir.Ca02949
I
0.000
Pavir.Cb00038
Panicum virgatum
Pavir.Cb00038
I
0.000
Pavir.Ia00505
Panicum virgatum
Pavir.Ia00505
I
0.000
Pavir.J36433
Panicum virgatum
Pavir.J36433
I
0.000
Pavir.J37910
Panicum virgatum
Pavir.J37910
I
0.000
PDK_20s1781021g001
Phoenix dactylifera
PDK_20s1781021g001
I
0.000
PGSC0003DMG400001362
Solanum tuberosum
PGSC0003DMG400001362
I
0.000
PGSC0003DMG400019904
Solanum tuberosum
PGSC0003DMG400019904
I
0.000
PGSC0003DMG400022964
Solanum tuberosum
PGSC0003DMG400022964
I
0.000
PK10344.1
Cannabis sativa
PK10344.1
D
0.000
PK16724.1
Cannabis sativa
PK16724.1
I
0.000
PK17676.1
Cannabis sativa
PK17676.1
I
0.000
Pm010440
Prunus mume
Pm010440
I
0.000
Pm029788
Prunus mume
Pm029788
I
0.000
POPTR_0004s06440
Populus trichocarpa
POPTR_0004s06440
I
0.000
POPTR_0004s11510
Populus trichocarpa
POPTR_0004s11510
I
0.000
POPTR_0011s02350
Populus trichocarpa
POPTR_0011s02350
I
0.000
POPTR_0015s06980
Populus trichocarpa
POPTR_0015s06980
I
0.000
PRUPE_ppa004612mg
Prunus persica
PRUPE_ppa004612mg
I
0.000
SapurV1A.0232s0150
Salix purpurea
SapurV1A.0232s0150
I
0.000
SapurV1A.0323s0010
Salix purpurea
SapurV1A.0323s0010
I
0.000
SapurV1A.0901s0090
Salix purpurea
SapurV1A.0901s0090
I
0.000
SapurV1A.0971s0180
Salix purpurea
SapurV1A.0971s0180
I
0.000
SapurV1A.1394s0060
Salix purpurea
SapurV1A.1394s0060
I
0.000
Sb01g006020
Sorghum bicolor
Sb01g006020
I
0.000
Sb02g003070
Sorghum bicolor
Sb02g003070
I
0.000
Sb08g021690
Sorghum bicolor
Sb08g021690
I
0.000
Si019114m.g
Setaria italica
Si019114m.g
I
0.000
Si022811m.g
Setaria italica
Si022811m.g
I
0.000
Si029871m.g
Setaria italica
Si029871m.g
I
0.000
Si036075m.g
Setaria italica
Si036075m.g
I
0.000
Solyc02g089020.1
Solanum lycopersicum
Solyc02g089020.1
I
0.000
Solyc08g048370.2
Solanum lycopersicum
Solyc08g048370.2
I
0.000
Solyc08g048390.1
Solanum lycopersicum
Solyc08g048390.1
I
0.000
TCM_029442
Theobroma cacao
TCM_029442
I
0.000
Thhalv10004440m.g
Eutrema salsugineum
Thhalv10004440m.g
I
0.000
Thhalv10014467m.g
Eutrema salsugineum
Thhalv10014467m.g
I
0.000
Thhalv10021021m.g
Eutrema salsugineum
Thhalv10021021m.g
I
0.000
Traes_2AL_EA60A06AC
Triticum aestivum
Traes_2AL_EA60A06AC
I
0.000
Traes_2BL_36A3AB3A2
Triticum aestivum
Traes_2BL_36A3AB3A2
I
0.000
Traes_5BL_2DDBAA0C2
Triticum aestivum
Traes_5BL_2DDBAA0C2
I
0.000
Traes_5BS_77558D2A3
Triticum aestivum
Traes_5BS_77558D2A3
I
0.000
Traes_5DS_643EDFE5B
Triticum aestivum
Traes_5DS_643EDFE5B
I
0.000
TCP2
Vitis vinifera
VIT_10s0003g03910
I
0.000
PTF1
Vitis vinifera
VIT_14s0068g00330
I
0.000