ONIVA11G00470 (Oryza nivara)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ONIVA11G00470 T344155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.854 0.378
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.833 0.323
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.833 0.315
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.831 0.370
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.823 0.331
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.823 0.354
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA11G00470.1 TCP 15 141

Links

Other TCP family TFs
Other Oryza nivara TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034630 Oryza indica BGIOSGA034630 I 0.983
ORUFI12G00880 Oryza rufipogon ORUFI12G00880 I 0.968
OGLUM12G00790 Oryza glumaepatula OGLUM12G00790 I 0.958
OBART12G00580 Oryza barthii OBART12G00580 I 0.940
PCF8 Oryza indica BGIOSGA037799 I 0.936
OGLUM12G20570 Oryza glumaepatula OGLUM12G20570 I 0.936
ONIVA12G17870 Oryza nivara ONIVA12G17870 I 0.936
ORGLA12G0161900 Oryza glaberrima ORGLA12G0161900 I 0.936
OMERI12G13760 Oryza meridionalis OMERI12G13760 I 0.934
OPUNC12G17090 Oryza punctata OPUNC12G17090 I 0.931
LPERR12G15920 Leersia perrieri LPERR12G15920 I 0.919
Si022811m.g Setaria italica Si022811m.g I 0.919
GRMZM2G180568 Zea mays GRMZM2G180568 I 0.917
Sb08g021690 Sorghum bicolor Sb08g021690 I 0.917
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I 0.916
MLOC_72581 Hordeum vulgare MLOC_72581 I 0.915
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I 0.915
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I 0.914
Pavir.J37910 Panicum virgatum Pavir.J37910 I 0.914
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I 0.913
OMERI02G31110 Oryza meridionalis OMERI02G31110 I 0.909
Pavir.Cb00038 Panicum virgatum Pavir.Cb00038 I 0.908
BRADI1G58450 Brachypodium distachyon BRADI1G58450 I 0.878
GSMUA_Achr2G12990_001 Musa acuminata GSMUA_Achr2G12990_001 I 0.877
ORUFI12G21090 Oryza rufipogon ORUFI12G21090 I 0.877
Gorai.009G153900 Gossypium raimondii Gorai.009G153900 I 0.877
GSMUA_Achr7G01160_001 Musa acuminata GSMUA_Achr7G01160_001 I 0.874
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I 0.873
Traes_5BL_2DDBAA0C2 Triticum aestivum Traes_5BL_2DDBAA0C2 I 0.873
Pavir.Ba03864 Panicum virgatum Pavir.Ba03864 I 0.873
Pavir.J36433 Panicum virgatum Pavir.J36433 I 0.873
GLYMA13G29160 Glycine max GLYMA13G29160 I 0.872
MLOC_63989 Hordeum vulgare MLOC_63989 I 0.872
GSMUA_Achr4G22960_001 Musa acuminata GSMUA_Achr4G22960_001 I 0.871
Traes_2AL_EA60A06AC Triticum aestivum Traes_2AL_EA60A06AC I 0.871
Ciclev10014986m.g Citrus clementina Ciclev10014986m.g I 0.871
orange1.1g009938m.g Citrus sinensis orange1.1g009938m.g I 0.871
GRMZM2G089361 Zea mays GRMZM2G089361 I 0.870
GSMUA_Achr5G02530_001 Musa acuminata GSMUA_Achr5G02530_001 I 0.869
LPERR03G30870 Leersia perrieri LPERR03G30870 I 0.869
Ca_00482 Cicer arietinum Ca_00482 I 0.869
cassava2420.valid.m1 Manihot esculenta cassava2420.valid.m1 I 0.869
SapurV1A.0971s0180 Salix purpurea SapurV1A.0971s0180 I 0.869
SapurV1A.1394s0060 Salix purpurea SapurV1A.1394s0060 I 0.869
GLYMA15G09910 Glycine max GLYMA15G09910 I 0.867
ORUFI07G02160 Oryza rufipogon ORUFI07G02160 N 0.867
Si019114m.g Setaria italica Si019114m.g I 0.867
Traes_2BL_36A3AB3A2 Triticum aestivum Traes_2BL_36A3AB3A2 I 0.867
Gorai.011G046000 Gossypium raimondii Gorai.011G046000 I 0.867
GRMZM2G020805 Zea mays GRMZM2G020805 I 0.866
POPTR_0011s02350 Populus trichocarpa POPTR_0011s02350 I 0.866
Sb02g003070 Sorghum bicolor Sb02g003070 I 0.866
TCM_029442 Theobroma cacao TCM_029442 I 0.866
TCP2 Vitis vinifera VIT_10s0003g03910 I 0.866
SapurV1A.0232s0150 Salix purpurea SapurV1A.0232s0150 I 0.866
PRUPE_ppa004612mg Prunus persica PRUPE_ppa004612mg I 0.865
Pm010440 Prunus mume Pm010440 I 0.865
29693.m001968 Ricinus communis 29693.m001968 I 0.865
cassava7638.valid.m1 Manihot esculenta cassava7638.valid.m1 I 0.865
PK16724.1 Cannabis sativa PK16724.1 I 0.865
OBART02G32460 Oryza barthii OBART02G32460 I 0.864
ORGLA03G0335700 Oryza glaberrima ORGLA03G0335700 I 0.864
MDP0000287069 Malus domestica MDP0000287069 I 0.863
POPTR_0004s06440 Populus trichocarpa POPTR_0004s06440 I 0.862
PCF6 Oryza indica BGIOSGA013684 I 0.861
OGLUM03G36280 Oryza glumaepatula OGLUM03G36280 I 0.861
OMERI03G33790 Oryza meridionalis OMERI03G33790 I 0.861
ONIVA03G37780 Oryza nivara ONIVA03G37780 I 0.861
ORUFI03G38070 Oryza rufipogon ORUFI03G38070 I 0.861
PCF6 Oryza sativa OS03G0785800 I 0.861
OMERI04G02350 Oryza meridionalis OMERI04G02350 N 0.860
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I 0.860
Si036075m.g Setaria italica Si036075m.g I 0.859
Ca_05033 Cicer arietinum Ca_05033 I 0.859
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I 0.859
Lus10023297.g Linum usitatissimum Lus10023297.g I 0.859
MTR_4g109660 Medicago truncatula MTR_4g109660 I 0.858
Solyc08g048390.1 Solanum lycopersicum Solyc08g048390.1 I 0.857
MLOC_10214 Hordeum vulgare MLOC_10214 I 0.856
GLYMA08G10350 Glycine max GLYMA08G10350 I 0.854
Cucsa.047860 Cucumis sativus Cucsa.047860 I 0.854
MDP0000927314 Malus domestica MDP0000927314 I 0.854
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.854
GLYMA05G27367 Glycine max GLYMA05G27367 I 0.853
Cla019865 Citrullus lanatus Cla019865 I 0.852
Cucsa.111880 Cucumis sativus Cucsa.111880 I 0.852
PGSC0003DMG400019904 Solanum tuberosum PGSC0003DMG400019904 I 0.851
Solyc08g048370.2 Solanum lycopersicum Solyc08g048370.2 I 0.851
Sb01g006020 Sorghum bicolor Sb01g006020 I 0.849
OMERI07G02020 Oryza meridionalis OMERI07G02020 I 0.848
OPUNC07G03260 Oryza punctata OPUNC07G03260 I 0.848
GRMZM2G115516 Zea mays GRMZM2G115516 I 0.847
PGSC0003DMG400022964 Solanum tuberosum PGSC0003DMG400022964 I 0.847
LPERR07G02820 Leersia perrieri LPERR07G02820 I 0.845
evm.TU.supercontig_17.1 Carica papaya evm.TU.supercontig_17.1 I 0.845
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I 0.844
AMTR_s00092p00113360 Amborella trichopoda AMTR_s00092p00113360 I 0.843
mgf016959m Mimulus guttatus mgf016959m I 0.841
Cagra.3678s0010 Capsella grandiflora Cagra.3678s0010 I 0.841
gene30370-v1.0-hybrid Fragaria vesca gene30370-v1.0-hybrid I 0.840
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I 0.840
Lus10034679.g Linum usitatissimum Lus10034679.g I 0.839
Bo3g147760 Brassica oleracea Bo3g147760 I 0.837
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I 0.837
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I 0.837
GSMUA_Achr7G13980_001 Musa acuminata GSMUA_Achr7G13980_001 I 0.836
Ca_13216 Cicer arietinum Ca_13216 I 0.836
mgf024988m Mimulus guttatus mgf024988m I 0.836
Pavir.Ia00505 Panicum virgatum Pavir.Ia00505 I 0.835
PK17676.1 Cannabis sativa PK17676.1 I 0.835
Bra029344 Brassica rapa Bra029344 I 0.834
TCP5 Arabidopsis thaliana AT5G60970 D 0.833
Bo2g161240 Brassica oleracea Bo2g161240 I 0.833
Bra010789 Brassica rapa Bra010789 I 0.833
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D 0.833
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I 0.833
Carubv10026656m.g Capsella rubella Carubv10026656m.g I 0.833
Bo7g105960 Brassica oleracea Bo7g105960 I 0.832
Bra012600 Brassica rapa Bra012600 I 0.832
PCF5 Oryza indica BGIOSGA002128 I 0.831
MTR_3g026050 Medicago truncatula MTR_3g026050 I 0.831
OBART01G07230 Oryza barthii OBART01G07230 I 0.831
OGLUM01G08160 Oryza glumaepatula OGLUM01G08160 I 0.831
OMERI01G07200 Oryza meridionalis OMERI01G07200 I 0.831
ONIVA01G09270 Oryza nivara ONIVA01G09270 I 0.831
OPUNC01G06940 Oryza punctata OPUNC01G06940 I 0.831
ORGLA01G0062300 Oryza glaberrima ORGLA01G0062300 I 0.831
ORUFI01G07780 Oryza rufipogon ORUFI01G07780 I 0.831
OS01G0213800 Oryza sativa OS01G0213800 D 0.831
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I 0.831
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I 0.830
mgf007729m Mimulus guttatus mgf007729m I 0.830
MDP0000155433 Malus domestica MDP0000155433 I 0.830
Bo1g019520 Brassica oleracea Bo1g019520 I 0.829
Bostr.30275s0311 Boechera stricta Bostr.30275s0311 I 0.829
Carubv10011113m.g Capsella rubella Carubv10011113m.g I 0.829
Bo7g098260 Brassica oleracea Bo7g098260 I 0.828
Bra012990 Brassica rapa Bra012990 I 0.828
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I 0.828
30138.m003959 Ricinus communis 30138.m003959 I 0.828
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I 0.827
Ca_24196 Cicer arietinum Ca_24196 I 0.827
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I 0.827
AC205574.3_FG006 Zea mays AC205574.3_FG006 I 0.826
GRMZM2G148022 Zea mays GRMZM2G148022 I 0.826
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I 0.826
Bostr.1460s0130 Boechera stricta Bostr.1460s0130 I 0.826
GLYMA08G27155 Glycine max GLYMA08G27155 I 0.824
GLYMA18G50371 Glycine max GLYMA18G50371 I 0.824
PTF1 Vitis vinifera VIT_14s0068g00330 I 0.824
TCP2 Arabidopsis lyrata fgenesh2_kg.7__2455__AT4G18390.1 D 0.823
OLONG_003082 Oryza longistaminata OLONG_003082 I 0.823
Si029871m.g Setaria italica Si029871m.g I 0.823
Pm029788 Prunus mume Pm029788 I 0.823
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I 0.823
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I 0.823
Thhalv10021021m.g Eutrema salsugineum Thhalv10021021m.g I 0.823
PK10344.1 Cannabis sativa PK10344.1 D 0.823
BRADI1G06460 Brachypodium distachyon BRADI1G06460 I 0.822
LPERR01G06830 Leersia perrieri LPERR01G06830 I 0.822
MTR_2g090960 Medicago truncatula MTR_2g090960 I 0.822