BGIOSGA034630 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA034630 T343717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.854 0.378
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.833 0.323
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.833 0.315
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.831 0.370
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.823 0.331
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.823 0.354
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA034630-PA TCP 15 141

Links

Other TCP family TFs
Other Oryza indica TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA11G00470 Oryza nivara ONIVA11G00470 I 0.983
ORUFI12G00880 Oryza rufipogon ORUFI12G00880 I 0.968
OGLUM12G00790 Oryza glumaepatula OGLUM12G00790 I 0.958
OBART12G00580 Oryza barthii OBART12G00580 I 0.940
PCF8 Oryza indica BGIOSGA037799 I 0.936
OGLUM12G20570 Oryza glumaepatula OGLUM12G20570 I 0.936
ONIVA12G17870 Oryza nivara ONIVA12G17870 I 0.936
ORGLA12G0161900 Oryza glaberrima ORGLA12G0161900 I 0.936
OMERI12G13760 Oryza meridionalis OMERI12G13760 I 0.934
OPUNC12G17090 Oryza punctata OPUNC12G17090 I 0.931
LPERR12G15920 Leersia perrieri LPERR12G15920 I 0.919
Si022811m.g Setaria italica Si022811m.g I 0.919
GRMZM2G180568 Zea mays GRMZM2G180568 I 0.917
Sb08g021690 Sorghum bicolor Sb08g021690 I 0.917
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I 0.916
MLOC_72581 Hordeum vulgare MLOC_72581 I 0.915
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I 0.915
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I 0.914
Pavir.J37910 Panicum virgatum Pavir.J37910 I 0.914
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I 0.913
OMERI02G31110 Oryza meridionalis OMERI02G31110 I 0.909
Pavir.Cb00038 Panicum virgatum Pavir.Cb00038 I 0.908
BRADI1G58450 Brachypodium distachyon BRADI1G58450 I 0.878
GSMUA_Achr2G12990_001 Musa acuminata GSMUA_Achr2G12990_001 I 0.877
ORUFI12G21090 Oryza rufipogon ORUFI12G21090 I 0.877
Gorai.009G153900 Gossypium raimondii Gorai.009G153900 I 0.877
GSMUA_Achr7G01160_001 Musa acuminata GSMUA_Achr7G01160_001 I 0.874
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I 0.873
Traes_5BL_2DDBAA0C2 Triticum aestivum Traes_5BL_2DDBAA0C2 I 0.873
Pavir.Ba03864 Panicum virgatum Pavir.Ba03864 I 0.873
Pavir.J36433 Panicum virgatum Pavir.J36433 I 0.873
GLYMA13G29160 Glycine max GLYMA13G29160 I 0.872
MLOC_63989 Hordeum vulgare MLOC_63989 I 0.872
GSMUA_Achr4G22960_001 Musa acuminata GSMUA_Achr4G22960_001 I 0.871
Traes_2AL_EA60A06AC Triticum aestivum Traes_2AL_EA60A06AC I 0.871
Ciclev10014986m.g Citrus clementina Ciclev10014986m.g I 0.871
orange1.1g009938m.g Citrus sinensis orange1.1g009938m.g I 0.871
GRMZM2G089361 Zea mays GRMZM2G089361 I 0.870
GSMUA_Achr5G02530_001 Musa acuminata GSMUA_Achr5G02530_001 I 0.869
LPERR03G30870 Leersia perrieri LPERR03G30870 I 0.869
Ca_00482 Cicer arietinum Ca_00482 I 0.869
cassava2420.valid.m1 Manihot esculenta cassava2420.valid.m1 I 0.869
SapurV1A.0971s0180 Salix purpurea SapurV1A.0971s0180 I 0.869
SapurV1A.1394s0060 Salix purpurea SapurV1A.1394s0060 I 0.869
GLYMA15G09910 Glycine max GLYMA15G09910 I 0.867
ORUFI07G02160 Oryza rufipogon ORUFI07G02160 N 0.867
Si019114m.g Setaria italica Si019114m.g I 0.867
Traes_2BL_36A3AB3A2 Triticum aestivum Traes_2BL_36A3AB3A2 I 0.867
Gorai.011G046000 Gossypium raimondii Gorai.011G046000 I 0.867
GRMZM2G020805 Zea mays GRMZM2G020805 I 0.866
POPTR_0011s02350 Populus trichocarpa POPTR_0011s02350 I 0.866
Sb02g003070 Sorghum bicolor Sb02g003070 I 0.866
TCM_029442 Theobroma cacao TCM_029442 I 0.866
TCP2 Vitis vinifera VIT_10s0003g03910 I 0.866
SapurV1A.0232s0150 Salix purpurea SapurV1A.0232s0150 I 0.866
PRUPE_ppa004612mg Prunus persica PRUPE_ppa004612mg I 0.865
Pm010440 Prunus mume Pm010440 I 0.865
29693.m001968 Ricinus communis 29693.m001968 I 0.865
cassava7638.valid.m1 Manihot esculenta cassava7638.valid.m1 I 0.865
PK16724.1 Cannabis sativa PK16724.1 I 0.865
OBART02G32460 Oryza barthii OBART02G32460 I 0.864
ORGLA03G0335700 Oryza glaberrima ORGLA03G0335700 I 0.864
MDP0000287069 Malus domestica MDP0000287069 I 0.863
POPTR_0004s06440 Populus trichocarpa POPTR_0004s06440 I 0.862
PCF6 Oryza indica BGIOSGA013684 I 0.861
OGLUM03G36280 Oryza glumaepatula OGLUM03G36280 I 0.861
OMERI03G33790 Oryza meridionalis OMERI03G33790 I 0.861
ONIVA03G37780 Oryza nivara ONIVA03G37780 I 0.861
ORUFI03G38070 Oryza rufipogon ORUFI03G38070 I 0.861
PCF6 Oryza sativa OS03G0785800 I 0.861
OMERI04G02350 Oryza meridionalis OMERI04G02350 N 0.860
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I 0.860
Si036075m.g Setaria italica Si036075m.g I 0.859
Ca_05033 Cicer arietinum Ca_05033 I 0.859
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I 0.859
Lus10023297.g Linum usitatissimum Lus10023297.g I 0.859
MTR_4g109660 Medicago truncatula MTR_4g109660 I 0.858
Solyc08g048390.1 Solanum lycopersicum Solyc08g048390.1 I 0.857
MLOC_10214 Hordeum vulgare MLOC_10214 I 0.856
GLYMA08G10350 Glycine max GLYMA08G10350 I 0.854
Cucsa.047860 Cucumis sativus Cucsa.047860 I 0.854
MDP0000927314 Malus domestica MDP0000927314 I 0.854
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.854
GLYMA05G27367 Glycine max GLYMA05G27367 I 0.853
Cla019865 Citrullus lanatus Cla019865 I 0.852
Cucsa.111880 Cucumis sativus Cucsa.111880 I 0.852
PGSC0003DMG400019904 Solanum tuberosum PGSC0003DMG400019904 I 0.851
Solyc08g048370.2 Solanum lycopersicum Solyc08g048370.2 I 0.851
Sb01g006020 Sorghum bicolor Sb01g006020 I 0.849
OMERI07G02020 Oryza meridionalis OMERI07G02020 I 0.848
OPUNC07G03260 Oryza punctata OPUNC07G03260 I 0.848
GRMZM2G115516 Zea mays GRMZM2G115516 I 0.847
PGSC0003DMG400022964 Solanum tuberosum PGSC0003DMG400022964 I 0.847
LPERR07G02820 Leersia perrieri LPERR07G02820 I 0.845
evm.TU.supercontig_17.1 Carica papaya evm.TU.supercontig_17.1 I 0.845
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I 0.844
AMTR_s00092p00113360 Amborella trichopoda AMTR_s00092p00113360 I 0.843
mgf016959m Mimulus guttatus mgf016959m I 0.841
Cagra.3678s0010 Capsella grandiflora Cagra.3678s0010 I 0.841
gene30370-v1.0-hybrid Fragaria vesca gene30370-v1.0-hybrid I 0.840
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I 0.840
Lus10034679.g Linum usitatissimum Lus10034679.g I 0.839
Bo3g147760 Brassica oleracea Bo3g147760 I 0.837
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I 0.837
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I 0.837
GSMUA_Achr7G13980_001 Musa acuminata GSMUA_Achr7G13980_001 I 0.836
Ca_13216 Cicer arietinum Ca_13216 I 0.836
mgf024988m Mimulus guttatus mgf024988m I 0.836
Pavir.Ia00505 Panicum virgatum Pavir.Ia00505 I 0.835
PK17676.1 Cannabis sativa PK17676.1 I 0.835
Bra029344 Brassica rapa Bra029344 I 0.834
TCP5 Arabidopsis thaliana AT5G60970 D 0.833
Bo2g161240 Brassica oleracea Bo2g161240 I 0.833
Bra010789 Brassica rapa Bra010789 I 0.833
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D 0.833
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I 0.833
Carubv10026656m.g Capsella rubella Carubv10026656m.g I 0.833
Bo7g105960 Brassica oleracea Bo7g105960 I 0.832
Bra012600 Brassica rapa Bra012600 I 0.832
PCF5 Oryza indica BGIOSGA002128 I 0.831
MTR_3g026050 Medicago truncatula MTR_3g026050 I 0.831
OBART01G07230 Oryza barthii OBART01G07230 I 0.831
OGLUM01G08160 Oryza glumaepatula OGLUM01G08160 I 0.831
OMERI01G07200 Oryza meridionalis OMERI01G07200 I 0.831
ONIVA01G09270 Oryza nivara ONIVA01G09270 I 0.831
OPUNC01G06940 Oryza punctata OPUNC01G06940 I 0.831
ORGLA01G0062300 Oryza glaberrima ORGLA01G0062300 I 0.831
ORUFI01G07780 Oryza rufipogon ORUFI01G07780 I 0.831
OS01G0213800 Oryza sativa OS01G0213800 D 0.831
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I 0.831
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I 0.830
mgf007729m Mimulus guttatus mgf007729m I 0.830
MDP0000155433 Malus domestica MDP0000155433 I 0.830
Bo1g019520 Brassica oleracea Bo1g019520 I 0.829
Bostr.30275s0311 Boechera stricta Bostr.30275s0311 I 0.829
Carubv10011113m.g Capsella rubella Carubv10011113m.g I 0.829
Bo7g098260 Brassica oleracea Bo7g098260 I 0.828
Bra012990 Brassica rapa Bra012990 I 0.828
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I 0.828
30138.m003959 Ricinus communis 30138.m003959 I 0.828
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I 0.827
Ca_24196 Cicer arietinum Ca_24196 I 0.827
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I 0.827
AC205574.3_FG006 Zea mays AC205574.3_FG006 I 0.826
GRMZM2G148022 Zea mays GRMZM2G148022 I 0.826
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I 0.826
Bostr.1460s0130 Boechera stricta Bostr.1460s0130 I 0.826
GLYMA08G27155 Glycine max GLYMA08G27155 I 0.824
GLYMA18G50371 Glycine max GLYMA18G50371 I 0.824
PTF1 Vitis vinifera VIT_14s0068g00330 I 0.824
TCP2 Arabidopsis lyrata fgenesh2_kg.7__2455__AT4G18390.1 D 0.823
OLONG_003082 Oryza longistaminata OLONG_003082 I 0.823
Si029871m.g Setaria italica Si029871m.g I 0.823
Pm029788 Prunus mume Pm029788 I 0.823
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I 0.823
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I 0.823
Thhalv10021021m.g Eutrema salsugineum Thhalv10021021m.g I 0.823
PK10344.1 Cannabis sativa PK10344.1 D 0.823
BRADI1G06460 Brachypodium distachyon BRADI1G06460 I 0.822
LPERR01G06830 Leersia perrieri LPERR01G06830 I 0.822
MTR_2g090960 Medicago truncatula MTR_2g090960 I 0.822