CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM06G21280
(
Oryza glumaepatula
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
OGLUM06G21280
T065510_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HY5
M06790_2.00
Arabidopsis thaliana
DNHGVTGACGTSDMN
NKHSACGTCABCDNH
Dap-seq
OMalley et al.(2016)
HY5_colamp_v3a
0.824
0.859
HY5
M08407_2.00
Arabidopsis thaliana
NNHGMCACGTGKCDNN
NNHGMCACGTGKCDNN
ChIP-chip
Mathelier et al.(2014)
MA0551.1
0.824
0.859
HY5
M09919_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HY5_01
0.824
0.859
Q39895_SOYBN
M10048_2.00
Glycine max
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_01
0.824
0.844
Q39895_SOYBN
M10049_2.00
Glycine max
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$STF1_02
0.824
0.844
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM06G21280.1
bZIP
84
148
DKEHRRLKRLLRNRVSAQQARERKKAYMSELEARVKDLERSNSELEERLSTLQNENQMLRQVLKN
Links
Other
bZIP
family TFs
Other
Oryza glumaepatula
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA022379
Oryza indica
BGIOSGA022379
N
BRADI1G48330
Brachypodium distachyon
BRADI1G48330
N
GRMZM2G086277
Zea mays
GRMZM2G086277
N
LPERR06G03990
Leersia perrieri
LPERR06G03990
N
MLOC_71770
Hordeum vulgare
MLOC_71770
N
OB06G14080
Oryza brachyantha
OB06G14080
N
OGLUM06G04550
Oryza glumaepatula
OGLUM06G04550
N
OMERI06G05540
Oryza meridionalis
OMERI06G05540
N
ONIVA06G05620
Oryza nivara
ONIVA06G05620
N
OPUNC06G04230
Oryza punctata
OPUNC06G04230
N
ORGLA06G0040900
Oryza glaberrima
ORGLA06G0040900
N
OS06G0166200
Oryza sativa
OS06G0166200
N
Pavir.Da02143
Panicum virgatum
Pavir.Da02143
N
Pavir.J33131
Panicum virgatum
Pavir.J33131
N
Sb10g004570
Sorghum bicolor
Sb10g004570
N
Si006584m.g
Setaria italica
Si006584m.g
N