CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-atf-7
(
Pristionchus pacificus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
PPA19791
T067053_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG18054
M01141_2.00
Caenorhabditis briggsae
NRTGACGTSA
TSACGTCAYN
PBM
Lambert et al.(2019)
pTH11475
0.887
0.661
atf-7
M00595_2.00
Caenorhabditis elegans
NRTGACGTVN
NBACGTCAYN
PBM
Narasimhan et al.(2015)
pTH9314
0.887
0.661
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA19791
bZIP
385
455
DERRQTILERNKAAAVRYRKRKKEEHDEMITRCQQMEQERSAIIAFQTQNAALRREVDRLTTILKERQMKC
Links
Other
bZIP
family TFs
Other
Pristionchus pacificus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCAS_0B05740
Naumovozyma castellii
NCAS_0B05740
N