Alligator_sinensis_CCG002912.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG002912.1 T069834_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.927 0.952
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.927 0.952
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.927 0.952
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.881 0.742
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.881 0.742
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.881 0.742
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.881 0.742
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.881 0.742
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.881 0.742
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.881 0.742
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.881 0.742
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.881 0.742
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.881 0.742
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.881 0.742
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.881 0.742
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.879 0.742
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.879 0.742
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.879 0.742
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.879 0.742
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.879 0.742
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.823 0.532
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.823 0.532
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.823 0.532
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.823 0.532
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.823 0.532
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.823 0.532
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.823 0.532
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.823 0.532
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.823 0.532
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.823 0.532
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.823 0.532
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.823 0.532
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.823 0.532
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.823 0.532
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.823 0.532
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.823 0.532
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.823 0.532
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.823 0.532
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.823 0.532
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.787 0.581
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG002912.1 bZIP 84 145

Links

Other bZIP family TFs
Other Alligator sinensis TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009442 Aedes aegypti AAEL009442 I 0.783
Aan_R000237 Calypte anna Aan_R000237 I 0.929
Aan_R005677 Calypte anna Aan_R005677 I 0.881
Aan_R011482 Calypte anna Aan_R011482 I 0.929
ACYPI32234 Acyrthosiphon pisum ACYPI32234 I 0.784
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.881
Afo_R004731 Aptenodytes forsteri Afo_R004731 I 0.929
Brh_R009866 Buceros rhinoceros Brh_R009866 I 0.929
Brh_R010146 Buceros rhinoceros Brh_R010146 I 0.846
Cflo_05052--XP_392513.1_APIME Camponotus floridanus Cflo_05052--XP_392513.1_APIME I 0.794
CLEC002857 Cimex lectularius CLEC002857 I 0.797
Cmyd_10020806 Chelonia mydas Cmyd_10020806 I 0.929
DAPPUDRAFT_222762 Daphnia pulex DAPPUDRAFT_222762 I 0.807
ATF3 Anolis carolinensis ENSACAG00000006353 I 0.929
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.881
ENSAMEG00000001342 Ailuropoda melanoleuca ENSAMEG00000001342 I 0.927
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.881
ENSAMXG00000010494 Astyanax mexicanus ENSAMXG00000010494 I 0.903
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I 0.887
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.881
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.881
ENSAPLG00000012304 Anas platyrhynchos ENSAPLG00000012304 I 0.929
ATF3 Bos taurus ENSBTAG00000008545 I 0.927
JDP2 Bos taurus ENSBTAG00000009451 I 0.881
ENSBTAP00000011265-D1 Bos grunniens ENSBTAP00000011265-D1 I 0.927
ATF3 Canis familiaris ENSCAFG00000012339 I 0.927
JDP2 Canis familiaris ENSCAFG00000017042 I 0.881
ATF3 Choloepus hoffmanni ENSCHOG00000010259 I 0.927
ATF3 Callithrix jacchus ENSCJAG00000015735 I 0.890
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.881
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.881
ENSCPOG00000019424 Cavia porcellus ENSCPOG00000019424 I 0.927
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.881
ENSCSAG00000015405 Chlorocebus sabaeus ENSCSAG00000015405 I 0.927
ENSCSAVG00000000153 Ciona savignyi ENSCSAVG00000000153 I 0.791
atf3 Danio rerio ENSDARG00000007823 I 0.903
jdp2b Danio rerio ENSDARG00000020133 I 0.888
jdp2a Danio rerio ENSDARG00000040137 I 0.881
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.881
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I 0.926
ENSDORG00000006025 Dipodomys ordii ENSDORG00000006025 I 0.927
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.881
ATF3 Equus caballus ENSECAG00000011486 I 0.927
JDP2 Equus caballus ENSECAG00000014862 I 0.881
ATF3 Erinaceus europaeus ENSEEUG00000010993 I 0.916
ATF3 Echinops telfairi ENSETEG00000015701 I 0.927
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.881
ENSFALG00000012408 Ficedula albicollis ENSFALG00000012408 I 0.929
JDP2 Felis catus ENSFCAG00000029464 I 0.881
ATF3 Felis catus ENSFCAG00000029636 I 0.927
JDP2 Homo sapiens ENSG00000140044 D 0.881
ATF3 Homo sapiens ENSG00000162772 D 0.927
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I 0.878
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I 0.867
atf3 Gasterosteus aculeatus ENSGACG00000011997 I 0.882
JDP2 Gallus gallus ENSGALG00000010322 I 0.881
ATF3 Gallus gallus ENSGALG00000025887 I 0.929
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.881
ATF3 Gorilla gorilla ENSGGOG00000014206 I 0.927
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I 0.867
ENSGMOG00000015382 Gadus morhua ENSGMOG00000015382 I 0.851
ENSGMOG00000016268 Gadus morhua ENSGMOG00000016268 I 0.877
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I 0.900
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I 0.889
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.881
ATF3 Loxodonta africana ENSLAFG00000032487 I 0.927
ENSLOCG00000000814 Lepisosteus oculatus ENSLOCG00000000814 I 0.887
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I 0.881
ENSMEUG00000007708 Macropus eugenii ENSMEUG00000007708 I 0.927
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.881
ATF3 Meleagris gallopavo ENSMGAG00000009708 I 0.929
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.881
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I 0.881
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.881
ATF3 Myotis lucifugus ENSMLUG00000015048 I 0.927
ATF3 Macaca mulatta ENSMMUG00000012185 I 0.927
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.881
ATF3 Monodelphis domestica ENSMODG00000003042 I 0.927
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.881
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.881
ENSMPUG00000015864 Mustela putorius furo ENSMPUG00000015864 I 0.927
Atf3 Mus musculus ENSMUSG00000026628 D 0.927
Jdp2 Mus musculus ENSMUSG00000034271 D 0.879
ENSNLEG00000002916 Nomascus leucogenys ENSNLEG00000002916 I 0.927
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.881
ATF3 Ornithorhynchus anatinus ENSOANG00000008502 I 0.927
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.881
ENSOARG00000010493 Ovis aries ENSOARG00000010493 I 0.927
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.881
ATF3 Oryctolagus cuniculus ENSOCUG00000017424 I 0.927
ATF3 Otolemur garnettii ENSOGAG00000005803 I 0.927
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.881
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I 0.870
ENSONIG00000018687 Oreochromis niloticus ENSONIG00000018687 I 0.884
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I 0.870
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.881
ATF3 Ochotona princeps ENSOPRG00000013252 I 0.927
jdp2a Oryzias latipes ENSORLG00000016515 I 0.875
jdp2b Oryzias latipes ENSORLG00000017506 I 0.870
atf3 Oryzias latipes ENSORLG00000019980 I 0.895
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I 0.881
ENSP00000355954 Macaca fascicularis ENSP00000355954 I 0.927
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.881
ENSPANG00000021687 Papio anubis ENSPANG00000021687 I 0.927
ATF3 Procavia capensis ENSPCAG00000000178 I 0.916
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I 0.870
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I 0.870
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I 0.870
ENSPFOG00000017099 Poecilia formosa ENSPFOG00000017099 I 0.893
ENSPMAG00000000427 Petromyzon marinus ENSPMAG00000000427 I 0.875
ENSPMAG00000006157 Petromyzon marinus ENSPMAG00000006157 I 0.790
ENSPPYG00000000235 Pongo abelii ENSPPYG00000000235 I 0.927
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.881
ENSPSIG00000017647 Pelodiscus sinensis ENSPSIG00000017647 I 0.854
ENSPSIG00000017967 Pelodiscus sinensis ENSPSIG00000017967 I 0.929
ATF3 Pan troglodytes ENSPTRG00000001962 I 0.927
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.881
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.881
ATF3 Pteropus vampyrus ENSPVAG00000011826 I 0.797
Atf3 Rattus norvegicus ENSRNOG00000003745 I 0.927
Jdp2 Rattus norvegicus ENSRNOG00000008224 D 0.879
ENSSHAG00000010413 Sarcophilus harrisii ENSSHAG00000010413 I 0.927
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.881
ATF3 Sus scrofa ENSSSCG00000015595 I 0.927
ENSSTOG00000007121 Ictidomys tridecemlineatus ENSSTOG00000007121 I 0.927
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.881
ATF3 Tupaia belangeri ENSTBEG00000002717 I 0.927
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.881
ATF3 Taeniopygia guttata ENSTGUG00000003050 I 0.929
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.881
atf3 Tetraodon nigroviridis ENSTNIG00000002524 I 0.861
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I 0.872
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I 0.870
jdp2b Takifugu rubripes ENSTRUG00000010344 I 0.872
atf3 Takifugu rubripes ENSTRUG00000015975 I 0.873
jdp2a Takifugu rubripes ENSTRUG00000018323 I 0.861
ENSTSYG00000010193 Tarsius syrichta ENSTSYG00000010193 I 0.927
ATF3 Tursiops truncatus ENSTTRG00000013897 I 0.927
ENSVPAG00000003090 Vicugna pacos ENSVPAG00000003090 I 0.786
ATF3 Vicugna pacos ENSVPAG00000011563 I 0.927
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I 0.870
ENSXMAG00000004443 Xiphophorus maculatus ENSXMAG00000004443 I 0.893
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I 0.870
Atf3 Drosophila melanogaster FBgn0028550 D 0.787
GA10981 Drosophila pseudoobscura FBgn0071037 I 0.782
GH24925 Drosophila grimshawi FBgn0132380 I 0.782
GL14394 Drosophila persimilis FBgn0151999 I 0.782
GK19912 Drosophila willistoni FBgn0221909 I 0.782
GB53401 Apis mellifera GB53401 I 0.794
Gfo_R010939 Geospiza fortis Gfo_R010939 I 0.929
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.881
HMEL006570 Heliconius melpomene HMEL006570 I 0.789
Hsal_14793--XP_392513.1_APIME Harpegnathos saltator Hsal_14793--XP_392513.1_APIME I 0.794
ISCW023105 Ixodes scapularis ISCW023105 I 0.814
LDEC018714 Leptinotarsa decemlineata LDEC018714 I 0.789
MCINX010628 Melitaea cinxia MCINX010628 I 0.789
Myotis_brandtii_Atf3_10018256 Myotis brandtii Myotis_brandtii_Atf3_10018256 I 0.927
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.881
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.881
Ogr11165 Ophisaurus gracilis Ogr11165 I 0.929
PHUM288370 Pediculus humanus PHUM288370 I 0.785
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.881
Pvit_13387 Pogona vitticeps Pvit_13387 I 0.918
RPRC001561 Rhodnius prolixus RPRC001561 I 0.789
SINV20083 Solenopsis invicta SINV20083 I 0.794
Tal_R002996 Tyto alba Tal_R002996 I 0.929
TC008201 Tribolium castaneum TC008201 I 0.798
atf3 Xenopus tropicalis XB-GENE-6085251 I 0.913
atf3.L Xenopus laevis XB-GENE-6085256 I 0.906