Pavir.Ab00505 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Ab00505 T072306_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.884 0.984
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.833 0.683
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.795 0.619
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.795 0.619
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.789 0.571
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab00505.1.p bZIP 127 189

Links

Other bZIP family TFs
Other Panicum virgatum TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28976.m000155 Ricinus communis 28976.m000155 N 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.786
30138.m003866 Ricinus communis 30138.m003866 I 0.790
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.785
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.000
Bo2g012800 Brassica oleracea Bo2g012800 I 0.790
Bo3g010620 Brassica oleracea Bo3g010620 I 0.000
Bo3g010750 Brassica oleracea Bo3g010750 I 0.000
Bo9g163740 Brassica oleracea Bo9g163740 I 0.000
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.790
Bra006324 Brassica rapa Bra006324 I 0.000
Bra008670 Brassica rapa Bra008670 I 0.000
Bra023540 Brassica rapa Bra023540 I 0.000
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.795
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.786
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.790
cassava40461.m1 Manihot esculenta cassava40461.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.790
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.790
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.800
Cla016748 Citrullus lanatus Cla016748 I 0.788
Cla016841 Citrullus lanatus Cla016841 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.785
Cucsa.109420 Cucumis sativus Cucsa.109420 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.788
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.785
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.790
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.801
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.790
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.801
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.000
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.801
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
GSMUA_Achr10G20720_001 Musa acuminata GSMUA_Achr10G20720_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.785
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I 0.789
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.815
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.815
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.000
MDP0000183562 Malus domestica MDP0000183562 I 0.807
MDP0000205823 Malus domestica MDP0000205823 I 0.000
MDP0000239026 Malus domestica MDP0000239026 I 0.000
MDP0000261154 Malus domestica MDP0000261154 N 0.000
MDP0000863909 Malus domestica MDP0000863909 I 0.000
MDP0000891108 Malus domestica MDP0000891108 I 0.807
MDP0000891899 Malus domestica MDP0000891899 I 0.786
mgf003466m Mimulus guttatus mgf003466m I 0.000
mgf004063m Mimulus guttatus mgf004063m N 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.790
mgf018581m Mimulus guttatus mgf018581m I 0.000
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.804
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PK01815.1 Cannabis sativa PK01815.1 N 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.790
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.790
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.815
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.789
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.793
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.000
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.000
VIT_00s0541g00020 Vitis vinifera VIT_00s0541g00020 N 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.801
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.000