estExt_Genewise1.C_2060077 (Physcomitrella patens)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 estExt_Genewise1.C_2060077 T070929_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_Genewise1.C_2060077
M01832_2.00		 Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.823 0.783
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.801 0.717
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.801 0.717
BZIP63
M01787_2.00 		Arabidopsis thaliana
NNNWSACGTGKN
NMCACGTSWNNN		 PBM
Weirauch et al.(2014)
pTH7300 		0.794 0.683
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.789 0.600
For this family, TFs with SR scores > 0.782 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01832_2.00 bZIP 51 110

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_2060077 bZIP 88 147

Links

Other bZIP family TFs
Other Physcomitrella patens TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.847
Bra020620 Brassica rapa Bra020620 I 0.837
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.828
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.828
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.827
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.827
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.827
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.827
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.827
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.827
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.827
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.827
TCM_026349 Theobroma cacao TCM_026349 I 0.827
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.827
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.827
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.827
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.827
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.827
29598.m000468 Ricinus communis 29598.m000468 I 0.824
mgf009803m Mimulus guttatus mgf009803m I 0.824
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.824
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.823
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.823
Ca_03753 Cicer arietinum Ca_03753 I 0.823
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.823
PK05128.1 Cannabis sativa PK05128.1 D 0.823
Bra010010 Brassica rapa Bra010010 I 0.822
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.820
Bo2g151850 Brassica oleracea Bo2g151850 I 0.818
mgf012838m Mimulus guttatus mgf012838m I 0.817
Pm003522 Prunus mume Pm003522 I 0.815
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.814
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.814
MDP0000270365 Malus domestica MDP0000270365 I 0.814
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.814
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.813
Cla015037 Citrullus lanatus Cla015037 I 0.812
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.812
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.811
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I 0.810
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.810
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.808
Bo7g093030 Brassica oleracea Bo7g093030 I 0.808
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.806
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.806
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.805
Ca_01234 Cicer arietinum Ca_01234 I 0.805
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.804
POPTR_0005s05470 Populus trichocarpa POPTR_0005s05470 I 0.804
Cla011478 Citrullus lanatus Cla011478 I 0.803
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.803
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.801
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.799
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.799
BZIP63 Arabidopsis thaliana AT5G28770 D 0.799
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.798
OS12G0601800 Oryza sativa OS12G0601800 I 0.798
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.798
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.798
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.798
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.798
OBART12G18120 Oryza barthii OBART12G18120 I 0.798
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.797
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.796
MDP0000176747 Malus domestica MDP0000176747 I 0.796
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I 0.796
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I 0.796
Pm020231 Prunus mume Pm020231 I 0.796
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.795
Cla020112 Citrullus lanatus Cla020112 I 0.795
Cagra.5456s0001 Capsella grandiflora Cagra.5456s0001 I 0.794
Carubv10001450m.g Capsella rubella Carubv10001450m.g I 0.794
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.794
PK11472.1 Cannabis sativa PK11472.1 I 0.793
Bostr.25517s0001 Boechera stricta Bostr.25517s0001 I 0.793
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.790
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.789
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.789
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.789
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.789
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.789
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.789
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.789
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.789
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.789
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.789
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.789
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.789
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.789
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.789
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.789
OS02G0266800 Oryza sativa OS02G0266800 D 0.789
OBART02G05680 Oryza barthii OBART02G05680 I 0.789
OS02G0175100 Oryza sativa OS02G0175100 I 0.789
OBART02G11580 Oryza barthii OBART02G11580 I 0.789
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.789
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.789
Si017778m.g Setaria italica Si017778m.g I 0.789
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.786
OB02G19520 Oryza brachyantha OB02G19520 I 0.785
OB02G14920 Oryza brachyantha OB02G14920 I 0.785
OB12G24740 Oryza brachyantha OB12G24740 I 0.782